Spatial multi-omics: novel tools to study the complexity of cardiovascular diseases
P Kiessling, C Kuppe - Genome Medicine, 2024 - Springer
Spatial multi-omic studies have emerged as a promising approach to comprehensively
analyze cells in tissues, enabling the joint analysis of multiple data modalities like …
analyze cells in tissues, enabling the joint analysis of multiple data modalities like …
Spatial multimodal analysis of transcriptomes and metabolomes in tissues
We present a spatial omics approach that combines histology, mass spectrometry imaging
and spatial transcriptomics to facilitate precise measurements of mRNA transcripts and low …
and spatial transcriptomics to facilitate precise measurements of mRNA transcripts and low …
Next-Generation Sequencing-Based Spatial Transcriptomics: A Perspective from Barcoding Chemistry
Gene expression profiling of tissue cells with spatial context is in high demand to reveal cell
types, locations, and intercellular or molecular interactions for physiological and …
types, locations, and intercellular or molecular interactions for physiological and …
Tissue characterization at an enhanced resolution across spatial omics platforms with deep generative model
B Li, F Bao, Y Hou, F Li, H Li, Y Deng, Q Dai - Nature Communications, 2024 - nature.com
Recent advances in spatial omics have expanded the spectrum of profiled molecular
categories beyond transcriptomics. However, many of these technologies are constrained by …
categories beyond transcriptomics. However, many of these technologies are constrained by …
Dissecting mammalian reproduction with spatial transcriptomics
X Zhang, Q Cao, S Rajachandran… - Human …, 2023 - academic.oup.com
BACKGROUND Mammalian reproduction requires the fusion of two specialized cells: an
oocyte and a sperm. In addition to producing gametes, the reproductive system also …
oocyte and a sperm. In addition to producing gametes, the reproductive system also …
Spatial mapping of the DNA adducts in cancer
KL Krieger, EK Mann, KJ Lee, E Bolterstein… - DNA repair, 2023 - Elsevier
DNA adducts and strand breaks are induced by various exogenous and endogenous
agents. Accumulation of DNA damage is implicated in many disease processes, including …
agents. Accumulation of DNA damage is implicated in many disease processes, including …
Lactobacillus casei-Derived Postbiotics Elevate the Bioaccessibility of Proteins via Allosteric Regulation of Pepsin and Trypsin and Introduction of Endopeptidases
Z Fan, W Jia - Journal of Agricultural and Food Chemistry, 2023 - ACS Publications
The potential of probiotics to benefit digestion has been widely reported, while its utilization
in high-risk patients and potential adverse reactions have focused interest on postbiotics. A …
in high-risk patients and potential adverse reactions have focused interest on postbiotics. A …
Hest-1k: A dataset for spatial transcriptomics and histology image analysis
Spatial transcriptomics (ST) enables interrogating the molecular composition of tissue with
ever-increasing resolution, depth, and sensitivity. However, costs, rapidly evolving …
ever-increasing resolution, depth, and sensitivity. However, costs, rapidly evolving …
A versatile tissue-rolling technique for spatial-omics analyses of the entire murine gastrointestinal tract
Tissues are dynamic and complex biological systems composed of specialized cell types
that interact with each other for proper biological function. To comprehensively characterize …
that interact with each other for proper biological function. To comprehensively characterize …
Single-Cell Sequencing in Neurodegenerative Disorders
J Pozojevic, M Spielmann - Molecular Diagnosis & Therapy, 2023 - Springer
Neurodegenerative disorders are typically characterized by late onset progressive damage
to specific (sub) populations of cells of the nervous system that are essential for mobility …
to specific (sub) populations of cells of the nervous system that are essential for mobility …