A review on mass spectrometry-based quantitative proteomics: Targeted and data independent acquisition
V Vidova, Z Spacil - Analytica chimica acta, 2017 - Elsevier
Mass spectrometry (MS) based proteomics have achieved a near-complete proteome
coverage in humans and in several other organisms, producing a wealth of information …
coverage in humans and in several other organisms, producing a wealth of information …
Parallel reaction monitoring using quadrupole‐Orbitrap mass spectrometer: principle and applications
A Bourmaud, S Gallien, B Domon - Proteomics, 2016 - Wiley Online Library
Targeted mass spectrometry‐based approaches are nowadays widely used for quantitative
proteomics studies and more recently have been implemented on high resolution/accurate …
proteomics studies and more recently have been implemented on high resolution/accurate …
Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis
Most proteomic studies use liquid chromatography coupled to tandem mass spectrometry to
identify and quantify the peptides generated by the proteolysis of a biological sample …
identify and quantify the peptides generated by the proteolysis of a biological sample …
Parallel reaction monitoring for high resolution and high mass accuracy quantitative, targeted proteomics
Selected reaction monitoring on a triple quadrupole mass spectrometer is currently
experiencing a renaissance within the proteomics community for its, as yet, unparalleled …
experiencing a renaissance within the proteomics community for its, as yet, unparalleled …
Targeted proteomic quantification on quadrupole-orbitrap mass spectrometer
S Gallien, E Duriez, C Crone, M Kellmann… - Molecular & cellular …, 2012 - ASBMB
There is an immediate need for improved methods to systematically and precisely quantify
large sets of peptides in complex biological samples. To date protein quantification in …
large sets of peptides in complex biological samples. To date protein quantification in …
mProphet: automated data processing and statistical validation for large-scale SRM experiments
Selected reaction monitoring (SRM) is a targeted mass spectrometric method that is
increasingly used in proteomics for the detection and quantification of sets of preselected …
increasingly used in proteomics for the detection and quantification of sets of preselected …
[HTML][HTML] Mass spectrometry based biomarker discovery, verification, and validation–quality assurance and control of protein biomarker assays
CE Parker, CH Borchers - Molecular oncology, 2014 - Elsevier
In its early years, mass spectrometry (MS)-based proteomics focused on the cataloging of
proteins found in different species or different tissues. By 2005, proteomics was being used …
proteins found in different species or different tissues. By 2005, proteomics was being used …
Pitfalls associated with the use of liquid chromatography–tandem mass spectrometry in the clinical laboratory
BACKGROUND Novel mass spectrometric techniques such as atmospheric pressure
ionization and tandem mass spectrometry have substantially extended the spectrum of …
ionization and tandem mass spectrometry have substantially extended the spectrum of …
Reproducible quantification of cancer-associated proteins in body fluids using targeted proteomics
R Hüttenhain, M Soste, N Selevsek, H Röst… - Science translational …, 2012 - science.org
The rigorous testing of hypotheses on suitable sample cohorts is a major limitation in
translational research. This is particularly the case for the validation of protein biomarkers; …
translational research. This is particularly the case for the validation of protein biomarkers; …
Technical aspects and inter-laboratory variability in native peptide profiling: The CE–MS experience
H Mischak, A Vlahou, JPA Ioannidis - Clinical biochemistry, 2013 - Elsevier
Mass spectrometry platforms have attracted a lot of interest in the last 2 decades as profiling
tools for native peptides and proteins with clinical potential. However, limitations associated …
tools for native peptides and proteins with clinical potential. However, limitations associated …