Rethinking the marine carbon cycle: factoring in the multifarious lifestyles of microbes

AZ Worden, MJ Follows, SJ Giovannoni, S Wilken… - Science, 2015 - science.org
BACKGROUND Marine ecosystems are composed of a diverse array of life forms, the
majority of which are unicellular—archaea, bacteria, and eukaryotes. The power of these …

Global biogeochemical impacts of phytoplankton: a trait‐based perspective

E Litchman, P de Tezanos Pinto, KF Edwards… - Journal of …, 2015 - Wiley Online Library
Phytoplankton are key players in the global carbon cycle, contributing about half of global
primary productivity. Within the phytoplankton, functional groups (characterized by distinct …

[HTML][HTML] The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through …

PJ Keeling, F Burki, HM Wilcox, B Allam, EE Allen… - PLoS …, 2014 - journals.plos.org
Current sampling of genomic sequence data from eukaryotes is relatively poor, biased, and
inadequate to address important questions about their biology, evolution, and ecology; this …

Pan genome of the phytoplankton Emiliania underpins its global distribution

BA Read, J Kegel, MJ Klute, A Kuo, SC Lefebvre… - Nature, 2013 - nature.com
Coccolithophores have influenced the global climate for over 200 million years. These
marine phytoplankton can account for 20 per cent of total carbon fixation in some systems …

Global biogeography of highly diverse protistan communities in soil

ST Bates, JC Clemente, GE Flores, WA Walters… - The ISME …, 2013 - academic.oup.com
Protists are ubiquitous members of soil microbial communities, but the structure of these
communities, and the factors that influence their diversity, are poorly understood. We used …

Unicellular cyanobacterium symbiotic with a single-celled eukaryotic alga

AW Thompson, RA Foster, A Krupke, BJ Carter… - Science, 2012 - science.org
Symbioses between nitrogen (N) 2–fixing prokaryotes and photosynthetic eukaryotes are
important for nitrogen acquisition in N-limited environments. Recently, a widely distributed …

Genome-reconstruction for eukaryotes from complex natural microbial communities

PT West, AJ Probst, IV Grigoriev, BC Thomas… - Genome …, 2018 - genome.cshlp.org
Microbial eukaryotes are integral components of natural microbial communities, and their
inclusion is critical for many ecosystem studies, yet the majority of published metagenome …

Microbial metagenomics: beyond the genome

JA Gilbert, CL Dupont - Annual review of marine science, 2011 - annualreviews.org
Metagenomics literally means “beyond the genome.” Marine microbial metagenomic
databases presently comprise∼ 400 billion base pairs of DNA, only∼ 3% of that found in 1 …

Probing the evolution, ecology and physiology of marine protists using transcriptomics

DA Caron, H Alexander, AE Allen… - Nature Reviews …, 2017 - nature.com
Protists, which are single-celled eukaryotes, critically influence the ecology and chemistry of
marine ecosystems, but genome-based studies of these organisms have lagged behind …

Choanoflagellates alongside diverse uncultured predatory protists consume the abundant open-ocean cyanobacterium Prochlorococcus

S Wilken, CCM Yung, C Poirier… - Proceedings of the …, 2023 - National Acad Sciences
Prochlorococcus is a key member of open-ocean primary producer communities. Despite its
importance, little is known about the predators that consume this cyanobacterium and make …