Culturing the uncultured marine fungi in the omics age: Opportunities and challenges

ZF Zhang, F Liu, LR Liu, M Li, L Cai, S Liu, J Mao - Fungal Biology Reviews, 2024 - Elsevier
Fungi are ubiquitous in all kinds of ecosystems with key ecological roles, while less than
10% of them have been described, of which, only about 1.2% are from marine habitats …

[HTML][HTML] The assembly and ecological roles of biofilms attached to plastic debris of Ashmore reef

D Zhang, B Calmanovici, H Marican, J Reisser… - Marine Pollution …, 2024 - Elsevier
Plastic pollution in the ocean is a global environmental hazard aggravated by poor
management of plastic waste and growth of annual plastic consumption. Microbial …

[HTML][HTML] Unraveling the role of bacterial communities in mangrove habitats under the urban influence, using a next-generation sequencing approach

M Ghose, AS Parab, CS Manohar, D Mohanan… - Journal of Sea …, 2024 - Elsevier
Mangrove ecosystems are vital coastal habitats with rich biodiversity and play a significant
role in carbon sequestration, these habitats are facing mounting threats from rapid …

Effects of different assembly strategies on gene annotation in activated sludge

M Liu, N Xu, B Chen, Z Zhang, X Chen, Y Zhu… - Environmental …, 2024 - Elsevier
Activated sludge comprises diverse bacteria, fungi, and other microorganisms, featuring a
rich repertoire of genes involved in antibiotic resistance, pollutant degradation, and …

[HTML][HTML] Living in mangroves: a syntrophic scenario unveiling a resourceful microbiome

M Laux, LP Ciapina, FM de Carvalho, AL Gerber… - BMC microbiology, 2024 - Springer
Background Mangroves are complex and dynamic coastal ecosystems under frequent
fluctuations in physicochemical conditions related to the tidal regime. The frequent variation …

Simple, reference-independent analyses help optimize hybrid assembly of microbial community metagenomes

GJ Smith, T van Alen, M van Kessel, S Lücker - bioRxiv, 2023 - biorxiv.org
Hybrid metagenomic assembly, leveraging both long-and short-read sequencing
technologies, of microbial communities is becoming an increasingly accessible approach …

[PDF][PDF] Fungal Biology Reviews

ZF Zhang, F Liu, LR Liu, M Li, L Cai, S Liu, J Mao - researchgate.net
Fungi are ubiquitous in all kinds of ecosystems with key ecological roles, while less than
10% of them have been described, of which, only about 1.2% are from marine habitats …