Targeting the dimerization of the main protease of coronaviruses: a potential broad-spectrum therapeutic strategy

B Goyal, D Goyal - ACS combinatorial science, 2020 - ACS Publications
A new coronavirus (CoV) caused a pandemic named COVID-19, which has become a
global health care emergency in the present time. The virus is referred to as SARS-CoV-2 …

[HTML][HTML] Targeting novel structural and functional features of coronavirus protease nsp5 (3CLpro, Mpro) in the age of COVID-19

MK Roe, NA Junod, AR Young… - Journal of General …, 2021 - microbiologyresearch.org
Coronavirus protease nsp5 (M pro, 3CL pro) remains a primary target for coronavirus
therapeutics due to its indispensable and conserved role in the proteolytic processing of the …

Peptide and protein recognition by designed molecules

MW Peczuh, AD Hamilton - Chemical reviews, 2000 - ACS Publications
A protein in its native, folded conformation creates a solvent-exposed (exterior) surface and
a solventexcluded (interior) surface (Figure 1). Enzyme active sites are most often found at …

Control of protein structure and function through surface recognition by tailored nanoparticle scaffolds

R Hong, NO Fischer, A Verma… - Journal of the …, 2004 - ACS Publications
Thioalkyl and thioalkylated oligo (ethylene glycol)(OEG) ligands with chain-end functionality
were used to fabricate water-soluble CdSe nanoparticle scaffolds. Surface recognition of …

Modulation of protein–protein interactions with small organic molecules

T Berg - Angewandte Chemie International Edition, 2003 - Wiley Online Library
Many proteins exert their biological roles as components of complexes, and the functions of
proteins are often determined by their specific interactions with other proteins. Because of …

Tunable inhibition and denaturation of α-chymotrypsin with amino acid-functionalized gold nanoparticles

CC You, M De, G Han, VM Rotello - Journal of the American …, 2005 - ACS Publications
Water-soluble gold nanoparticles bearing diverse l-amino acid terminals have been
fabricated to probe the effect of receptor surface on protein surface binding. The interaction …

[图书][B] Synthetic multivalent molecules: concepts and biomedical applications

S Choi - 2004 - books.google.com
This book provides basic principles of multivalent interactions found in biological systems as
well as an up-to-date and thorough coverage in design concepts, syntheses, and biological …

Rapid structural fluctuations of the free HIV protease flaps in solution: relationship to crystal structures and comparison with predictions of dynamics calculations

DI Freedberg, R Ishima, J Jacob, YX Wang… - Protein …, 2002 - Wiley Online Library
Crystal structures have shown that the HIV‐1 protease flaps, domains that control access to
the active site, are closed when the active site is occupied by a ligand. Although flap …

The structural stability of the HIV-1 protease

MJ Todd, N Semo, E Freire - Journal of molecular biology, 1998 - Elsevier
The most common strategy in the development of HIV-1 protease inhibitors has been the
design of high affinity transition state analogs that effectively compete with natural substrates …

Anatomy of β-strands at protein–protein interfaces

AM Watkins, PS Arora - ACS chemical biology, 2014 - ACS Publications
The development of inhibitors for protein–protein interactions frequently involves the mimicry
of secondary structure motifs. While helical protein–protein interactions have been heavily …