[HTML][HTML] A comprehensive review of image analysis methods for microorganism counting: from classical image processing to deep learning approaches
Microorganisms such as bacteria and fungi play essential roles in many application fields,
like biotechnique, medical technique and industrial domain. Microorganism counting …
like biotechnique, medical technique and industrial domain. Microorganism counting …
A critical review of measurement uncertainty in the enumeration of food micro-organisms
JEL Corry, B Jarvis, S Passmore, A Hedges - Food microbiology, 2007 - Elsevier
Derivation of uncertainty provides a way to standardize the expression of variability
associated with any analytical procedure. The published information on uncertainty …
associated with any analytical procedure. The published information on uncertainty …
Bacterial colony counting with convolutional neural networks in digital microbiology imaging
A Ferrari, S Lombardi, A Signoroni - Pattern Recognition, 2017 - Elsevier
Counting bacterial colonies on microbiological culture plates is a time-consuming, error-
prone, nevertheless essential quantitative task in Clinical Microbiology Laboratories. With …
prone, nevertheless essential quantitative task in Clinical Microbiology Laboratories. With …
[HTML][HTML] Automated counting of bacterial colony forming units on agar plates
SD Brugger, C Baumberger, M Jost, W Jenni… - PloS one, 2012 - journals.plos.org
Manual counting of bacterial colony forming units (CFUs) on agar plates is laborious and
error-prone. We therefore implemented a colony counting system with a novel segmentation …
error-prone. We therefore implemented a colony counting system with a novel segmentation …
Image generation by GAN and style transfer for agar plate image segmentation
Background and objectives. Deep learning models and specifically Convolutional Neural
Networks (CNNs) are becoming the leading approach in many computer vision tasks …
Networks (CNNs) are becoming the leading approach in many computer vision tasks …
Low‐cost, high‐throughput, automated counting of bacterial colonies
ML Clarke, RL Burton, AN Hill, M Litorja… - Cytometry Part …, 2010 - Wiley Online Library
Research involving bacterial pathogens often requires enumeration of bacteria colonies.
Here, we present a low‐cost, high‐throughput colony counting system consisting of colony …
Here, we present a low‐cost, high‐throughput colony counting system consisting of colony …
Response to different environmental stress conditions of industrial and laboratory Saccharomyces cerevisiae strains
A Garay-Arroyo, AA Covarrubias, I Clark, I Nino… - Applied microbiology …, 2004 - Springer
Two sets of Saccharomyces cerevisiae strains were compared for their physiological
responses to different stress conditions. One group is composed of three strains adapted to …
responses to different stress conditions. One group is composed of three strains adapted to …
Effective object recognition for automated counting of colonies in Petri dishes (automated colony counting)
J Marotz, C Lübbert, W Eisenbeiss - Computer methods and programs in …, 2001 - Elsevier
Determination of the number of colonies (colony forming units, CFU) is a standard method in
microbiological analysis to ensure the quality of drinking water. Normally this tedious work is …
microbiological analysis to ensure the quality of drinking water. Normally this tedious work is …
Bacterial colony counting by convolutional neural networks
A Ferrari, S Lombardi… - 2015 37th annual …, 2015 - ieeexplore.ieee.org
Counting bacterial colonies on microbiological culture plates is a time-consuming, error-
prone, nevertheless fundamental task in microbiology. Computer vision based approaches …
prone, nevertheless fundamental task in microbiology. Computer vision based approaches …
A review on methods for automatic counting of objects in digital images
JGA Barbedo - IEEE Latin America Transactions, 2012 - ieeexplore.ieee.org
A growing number of routine and research activities, in a wide variety of fields, have the
counting of certain types of objects (cells, people, insects, etc.) as one of their main …
counting of certain types of objects (cells, people, insects, etc.) as one of their main …