Plant RNA editing

AL Chateigner-Boutin, I Small - RNA biology, 2010 - Taylor & Francis
In plants, post-transcriptional modification of transcripts includes C-to-U, U-to-C and A-to-I
editing. RNA editing in plants is essential, with many mutants impaired in editing of specific …

Detection of RNA modifications

S Kellner, J Burhenne, M Helm - RNA biology, 2010 - Taylor & Francis
RNA nucleotide modifications are typically of low abundance and frequently go unnoticed by
standard detection methods of molecular biology and cell biology. With a burst of knowledge …

Complete chloroplast genome sequence of Magnolia kwangsiensis (Magnoliaceae): implication for DNA barcoding and population genetics

DY Kuang, H Wu, YL Wang, LM Gao, SZ Zhang… - Genome, 2011 - cdnsciencepub.com
Here, we report a completely sequenced plastome using Illumina/Solexa sequencing-by-
synthesis (SBS) technology. The plastome of Magnolia kwangsiensis Figlar & Noot. is 159 …

The Complete Chloroplast Genome Sequences of the Medicinal Plant Forsythia suspensa (Oleaceae)

W Wang, H Yu, J Wang, W Lei, J Gao, X Qiu… - International Journal of …, 2017 - mdpi.com
Forsythia suspensa is an important medicinal plant and traditionally applied for the treatment
of inflammation, pyrexia, gonorrhea, diabetes, and so on. However, there is limited …

The comparative chloroplast genomic analysis of photosynthetic orchids and developing DNA markers to distinguish Phalaenopsis orchids

CF Jheng, TC Chen, JY Lin, TC Chen, WL Wu… - Plant science, 2012 - Elsevier
The chloroplast genome of Phalaenopsis equestris was determined and compared to those
of Phalaenopsis aphrodite and Oncidium Gower Ramsey in Orchidaceae. The chloroplast …

A-to-I RNA editing shows dramatic up-regulation in osteosarcoma and broadly regulates tumor-related genes by altering microRNA target regions

F Ge, X Cao, Y Jiang - Journal of Applied Genetics, 2023 - Springer
Abstract A-to-I RNA editing is a prevalent type of RNA modification in animals. The
dysregulation of RNA editing has led to multiple human cancers. However, the role of RNA …

Capturing the Biofuel Wellhead and Powerhouse: The Chloroplast and Mitochondrial Genomes of the Leguminous Feedstock Tree Pongamia pinnata

SH Kazakoff, M Imelfort, D Edwards, J Koehorst… - PLoS …, 2012 - journals.plos.org
Pongamia pinnata (syn. Millettia pinnata) is a novel, fast-growing arboreal legume that bears
prolific quantities of oil-rich seeds suitable for the production of biodiesel and aviation …

The chloroplast and mitochondrial C‐to‐U RNA editing in Arabidopsis thaliana shows signals of adaptation

D Chu, L Wei - Plant Direct, 2019 - Wiley Online Library
Abstract C‐to‐U RNA editing is the conversion from cytidine to uridine at RNA level. In
plants, the genes undergo C‐to‐U RNA modification are mainly chloroplast and …

RNA editing in plants: a comprehensive survey of bioinformatics tools and databases

CL Giudice, I Hernández, LR Ceci, G Pesole… - Plant Physiology and …, 2019 - Elsevier
RNA editing is a widespread epitranscriptomic mechanism by which primary RNAs are
specifically modified through insertions/deletions or nucleotide substitutions. In plants, RNA …

Chloroplast genome variation in upland and lowland switchgrass

HA Young, CL Lanzatella, G Sarath, CM Tobias - PloS one, 2011 - journals.plos.org
Switchgrass (Panicum virgatum L.) exists at multiple ploidies and two phenotypically distinct
ecotypes. To facilitate interploidal comparisons and to understand the extent of sequence …