Current trends in computer aided drug design and a highlight of drugs discovered via computational techniques: A review
VT Sabe, T Ntombela, LA Jhamba… - European Journal of …, 2021 - Elsevier
Computer-aided drug design (CADD) is one of the pivotal approaches to contemporary pre-
clinical drug discovery, and various computational techniques and software programs are …
clinical drug discovery, and various computational techniques and software programs are …
Amyloid oligomers: A joint experimental/computational perspective on Alzheimer's disease, Parkinson's disease, type II diabetes, and amyotrophic lateral sclerosis
PH Nguyen, A Ramamoorthy, BR Sahoo… - Chemical …, 2021 - ACS Publications
Protein misfolding and aggregation is observed in many amyloidogenic diseases affecting
either the central nervous system or a variety of peripheral tissues. Structural and dynamic …
either the central nervous system or a variety of peripheral tissues. Structural and dynamic …
AutoDock Vina 1.2. 0: New docking methods, expanded force field, and python bindings
J Eberhardt, D Santos-Martins… - Journal of chemical …, 2021 - ACS Publications
AutoDock Vina is arguably one of the fastest and most widely used open-source programs
for molecular docking. However, compared to other programs in the AutoDock Suite, it lacks …
for molecular docking. However, compared to other programs in the AutoDock Suite, it lacks …
GNINA 1.0: molecular docking with deep learning
Molecular docking computationally predicts the conformation of a small molecule when
binding to a receptor. Scoring functions are a vital piece of any molecular docking pipeline …
binding to a receptor. Scoring functions are a vital piece of any molecular docking pipeline …
Accelerating AutoDock4 with GPUs and Gradient-Based Local Search
D Santos-Martins, L Solis-Vasquez… - Journal of chemical …, 2021 - ACS Publications
AutoDock4 is a widely used program for docking small molecules to macromolecular targets.
It describes ligand–receptor interactions using a physics-inspired scoring function that has …
It describes ligand–receptor interactions using a physics-inspired scoring function that has …
Computational determination of potential inhibitors of SARS-CoV-2 main protease
ST Ngo, N Quynh Anh Pham, L Thi Le… - Journal of chemical …, 2020 - ACS Publications
The novel coronavirus (SARS-CoV-2) has infected several million people and caused
thousands of deaths worldwide since December 2019. As the disease is spreading rapidly …
thousands of deaths worldwide since December 2019. As the disease is spreading rapidly …
Benchmark of popular free energy approaches revealing the inhibitors binding to SARS-CoV-2 Mpro
The COVID-19 pandemic has killed millions of people worldwide since its outbreak in
December 2019. The pandemic is caused by the SARS-CoV-2 virus whose main protease …
December 2019. The pandemic is caused by the SARS-CoV-2 virus whose main protease …
Acetylcholinesterase inhibitory activities of essential oils from Vietnamese traditional medicinal plants
Essential oils are promising as environmentally friendly and safe sources of pesticides for
human use. Furthermore, they are also of interest as aromatherapeutic agents in the …
human use. Furthermore, they are also of interest as aromatherapeutic agents in the …
[HTML][HTML] Deciphering the pharmacological mechanisms of Scutellaria baicalensis Georgi on oral leukoplakia by combining network pharmacology, molecular docking …
F Hou, Z Yu, YH Cheng, Y Liu, S Liang, F Zhang - Phytomedicine, 2022 - Elsevier
Background Oral leukoplakia (OLK), an uncharacterized pathological condition that occurs
as a white patch in the oral mucosa, is the most common precancerous condition. Scutellaria …
as a white patch in the oral mucosa, is the most common precancerous condition. Scutellaria …
[HTML][HTML] Molecular modeling and DFT studies of diazenylphenyl derivatives as a potential HBV and HCV antiviral agents
The need for novel antiviral drug particularly for hepatitis B (HBV) and C (HCV) virus cannot
be over emphasized hence, this work focuses on the stability and intermolecular interaction …
be over emphasized hence, this work focuses on the stability and intermolecular interaction …