DNA methylation analysis: choosing the right method
S Kurdyukov, M Bullock - Biology, 2016 - mdpi.com
In the burgeoning field of epigenetics, there are several methods available to determine the
methylation status of DNA samples. However, choosing the method that is best suited to …
methylation status of DNA samples. However, choosing the method that is best suited to …
MHC and Evolution in Teleosts
U Grimholt - Biology, 2016 - mdpi.com
Major histocompatibility complex (MHC) molecules are key players in initiating immune
responses towards invading pathogens. Both MHC class I and class II genes are present in …
responses towards invading pathogens. Both MHC class I and class II genes are present in …
Lactate-mediated epigenetic reprogramming regulates formation of human pancreatic cancer-associated fibroblasts
Even though pancreatic ductal adenocarcinoma (PDAC) is associated with fibrotic stroma,
the molecular pathways regulating the formation of cancer associated fibroblasts (CAFs) are …
the molecular pathways regulating the formation of cancer associated fibroblasts (CAFs) are …
Redistribution of H3K27me3 upon DNA hypomethylation results in de-repression of Polycomb target genes
JP Reddington, SM Perricone, CE Nestor… - Genome biology, 2013 - Springer
Background DNA methylation and the Polycomb repression system are epigenetic
mechanisms that play important roles in maintaining transcriptional repression. Recent …
mechanisms that play important roles in maintaining transcriptional repression. Recent …
Hypomethylation of noncoding DNA regions and overexpression of the long noncoding RNA, AFAP1-AS1, in Barrett's esophagus and esophageal adenocarcinoma
BACKGROUND & AIMS: Alterations in methylation of protein-coding genes are associated
with Barrett's esophagus (BE) and esophageal adenocarcinoma (EAC). Dysregulation of …
with Barrett's esophagus (BE) and esophageal adenocarcinoma (EAC). Dysregulation of …
Genome-wide analysis distinguishes hyperglycemia regulated epigenetic signatures of primary vascular cells
L Pirola, A Balcerczyk, RW Tothill, I Haviv… - Genome …, 2011 - genome.cshlp.org
Emerging evidence suggests that poor glycemic control mediates post-translational
modifications to the H3 histone tail. We are only beginning to understand the dynamic role of …
modifications to the H3 histone tail. We are only beginning to understand the dynamic role of …
Whole-genome bisulfite sequencing with improved accuracy and cost
M Suzuki, W Liao, F Wos, AD Johnston… - Genome …, 2018 - genome.cshlp.org
DNA methylation patterns in the genome both reflect and help to mediate transcriptional
regulatory processes. The digital nature of DNA methylation, present or absent on each …
regulatory processes. The digital nature of DNA methylation, present or absent on each …
Genome-wide DNA methylation patterns reveal clinically relevant predictive and prognostic subtypes in human osteosarcoma
Aberrant methylation of genomic DNA has been reported in many cancers. Specific DNA
methylation patterns have been shown to provide clinically useful prognostic information …
methylation patterns have been shown to provide clinically useful prognostic information …
Differential epigenome-wide DNA methylation patterns in childhood obesity-associated asthma
While DNA methylation plays a role in T-helper (Th) cell maturation, its potential
dysregulation in the non-atopic Th1-polarized systemic inflammation observed in obesity …
dysregulation in the non-atopic Th1-polarized systemic inflammation observed in obesity …
DNA methylation is developmentally regulated for genes essential for cardiogenesis
AA Chamberlain, M Lin, RL Lister… - Journal of the …, 2014 - Am Heart Assoc
Background DNA methylation is a major epigenetic mechanism altering gene expression in
development and disease. However, its role in the regulation of gene expression during …
development and disease. However, its role in the regulation of gene expression during …