The multifaceted roles of proline in cell behavior
Herein, we review the multifaceted roles of proline in cell biology. This peculiar cyclic imino
acid is:(i) A main precursor of extracellular collagens (the most abundant human proteins) …
acid is:(i) A main precursor of extracellular collagens (the most abundant human proteins) …
[HTML][HTML] Translation Rates and Protein Folding
AA Komar, E Samatova, MV Rodnina - Journal of Molecular Biology, 2023 - Elsevier
The mRNA coding sequence defines not only the amino acid sequence of the protein, but
also the speed at which the ribosome move along the mRNA while making the protein. The …
also the speed at which the ribosome move along the mRNA while making the protein. The …
Pyruvate Kinase M (PKM) binds ribosomes in a poly-ADP ribosylation dependent manner to induce translational stalling
In light of the numerous studies identifying post-transcriptional regulators on the surface of
the endoplasmic reticulum (ER), we asked whether there are factors that regulate …
the endoplasmic reticulum (ER), we asked whether there are factors that regulate …
Ribosome elongation kinetics of consecutively charged residues are coupled to electrostatic force
The speed of protein synthesis can dramatically change when consecutively charged
residues are incorporated into an elongating nascent protein by the ribosome. The …
residues are incorporated into an elongating nascent protein by the ribosome. The …
Translation in Bacillus subtilis is spatially and temporally coordinated during sporulation
O Iwańska, P Latoch, N Kopik, M Kovalenko… - Nature …, 2024 - nature.com
The transcriptional control of sporulation in Bacillus subtilis is reasonably well understood,
but its translational control is underexplored. Here, we use RNA-seq, ribosome profiling and …
but its translational control is underexplored. Here, we use RNA-seq, ribosome profiling and …
Remodeling of the ribosomal quality control and integrated stress response by viral ubiquitin deconjugases
J Liu, N Nagy, C Ayala-Torres, F Aguilar-Alonso… - Nature …, 2023 - nature.com
The strategies adopted by viruses to reprogram the translation and protein quality control
machinery and promote infection are poorly understood. Here, we report that the viral …
machinery and promote infection are poorly understood. Here, we report that the viral …
A nascent peptide code for translational control of mRNA stability in human cells
Stability of eukaryotic mRNAs is associated with their codon, amino acid, and GC content.
Yet, coding sequence motifs that predictably alter mRNA stability in human cells remain …
Yet, coding sequence motifs that predictably alter mRNA stability in human cells remain …
A dual-activity topoisomerase complex regulates mRNA translation and turnover
S Su, Y Xue, A Sharov, Y Zhang, SK Lee… - Nucleic Acids …, 2022 - academic.oup.com
Abstract Topoisomerase 3β (TOP3B) and TDRD3 form a dual-activity topoisomerase
complex that interacts with FMRP and can change the topology of both DNA and RNA. Here …
complex that interacts with FMRP and can change the topology of both DNA and RNA. Here …
Implications of tRNA abundance on translation elongation across bovine tissues
AK Goldkamp, DE Hagen - Frontiers in Genetics, 2023 - frontiersin.org
Introduction: Translation is a crucial stage of gene expression. It may also act as an
additional layer of regulation that plays an important role in gene expression and function …
additional layer of regulation that plays an important role in gene expression and function …
[HTML][HTML] A review of Ribosome profiling and tools used in Ribo-seq data analysis
MS Limbu, T Xiong, S Wang - Computational and Structural Biotechnology …, 2024 - Elsevier
Translational regulation plays the most critical role in gene expression. Ribosome profiling
sequencing (Ribo-Seq) is one of the methods to study translation and its regulation. It is a …
sequencing (Ribo-Seq) is one of the methods to study translation and its regulation. It is a …