Host–Parasite interactions in Entamoeba histolytica and Entamoeba dispar: what have we learned from their genomes?
IW Wilson, GD Weedall, N Hall - Parasite Immunology, 2012 - Wiley Online Library
Invasive amoebiasis caused by Entamoeba histolytica is a major global health problem.
Virulence is a rare outcome of infection, occurring in fewer than 1 in 10 infections. Not all …
Virulence is a rare outcome of infection, occurring in fewer than 1 in 10 infections. Not all …
AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species
C Aurrecoechea, A Barreto, J Brestelli… - Nucleic acids …, 2010 - academic.oup.com
Abstract AmoebaDB (http://AmoebaDB. org) and MicrosporidiaDB (http://MicrosporidiaDB.
org) are new functional genomic databases serving the amoebozoa and microsporidia …
org) are new functional genomic databases serving the amoebozoa and microsporidia …
Design and utilization of epitope-based databases and predictive tools
In the last decade, significant progress has been made in expanding the scope and depth of
publicly available immunological databases and online analysis resources, which have …
publicly available immunological databases and online analysis resources, which have …
Systems-Level Metabolic Flux Profiling Elucidates a Complete, Bifurcated Tricarboxylic Acid Cycle in Clostridium acetobutylicum
D Amador-Noguez, XJ Feng, J Fan… - Journal of …, 2010 - Am Soc Microbiol
Obligatory anaerobic bacteria are major contributors to the overall metabolism of soil and
the human gut. The metabolic pathways of these bacteria remain, however, poorly …
the human gut. The metabolic pathways of these bacteria remain, however, poorly …
Ergatis: a web interface and scalable software system for bioinformatics workflows
J Orvis, J Crabtree, K Galens, A Gussman… - …, 2010 - academic.oup.com
Motivation: The growth of sequence data has been accompanied by an increasing need to
analyze data on distributed computer clusters. The use of these systems for routine analysis …
analyze data on distributed computer clusters. The use of these systems for routine analysis …
Setting our bibliographic references free: towards open citation data
Purpose–Citation data needs to be recognised as a part of the Commons–those works that
are freely and legally available for sharing–and placed in an open repository. The paper …
are freely and legally available for sharing–and placed in an open repository. The paper …
Novel Burkholderia mallei virulence factors linked to specific host-pathogen protein interactions
V Memišević, N Zavaljevski, R Pieper… - Molecular & Cellular …, 2013 - ASBMB
Burkholderia mallei is an infectious intracellular pathogen whose virulence and resistance to
antibiotics makes it a potential bioterrorism agent. Given its genetic origin as a commensal …
antibiotics makes it a potential bioterrorism agent. Given its genetic origin as a commensal …
[HTML][HTML] Prioritizing drug targets in Clostridium botulinum with a computational systems biology approach
A computational and in silico system level framework was developed to identify and
prioritize the antibacterial drug targets in Clostridium botulinum (Clb), the causative agent of …
prioritize the antibacterial drug targets in Clostridium botulinum (Clb), the causative agent of …
Interrogation of the Burkholderia pseudomallei Genome to Address Differential Virulence among Isolates
JF Challacombe, CJ Stubben, CP Klimko, SL Welkos… - PLoS …, 2014 - journals.plos.org
Infection by the Gram-negative pathogen Burkholderia pseudomallei results in the disease
melioidosis, acquired from the environment in parts of southeast Asia and northern Australia …
melioidosis, acquired from the environment in parts of southeast Asia and northern Australia …
Differential expression of small RNAs from Burkholderia thailandensis in response to varying environmental and stress conditions
CJ Stubben, SN Micheva-Viteva, Y Shou… - BMC genomics, 2014 - Springer
Abstract Background Bacterial small RNAs (sRNAs) regulate gene expression by base-
pairing with downstream target mRNAs to attenuate translation of mRNA into protein at the …
pairing with downstream target mRNAs to attenuate translation of mRNA into protein at the …