Roles of RNA silencing in viral and non-viral plant immunity and in the crosstalk between disease resistance systems

S Lopez-Gomollon, DC Baulcombe - Nature Reviews Molecular Cell …, 2022 - nature.com
RNA silencing is a well-established antiviral immunity system in plants, in which small RNAs
guide Argonaute proteins to targets in viral RNA or DNA, resulting in virus repression. Virus …

Cis-regulatory sequences in plants: their importance, discovery, and future challenges

RJ Schmitz, E Grotewold, M Stam - The plant cell, 2022 - academic.oup.com
The identification and characterization of cis-regulatory DNA sequences and how they
function to coordinate responses to developmental and environmental cues is of paramount …

Dynamics and function of DNA methylation in plants

H Zhang, Z Lang, JK Zhu - Nature reviews Molecular cell biology, 2018 - nature.com
DNA methylation is a conserved epigenetic modification that is important for gene regulation
and genome stability. Aberrant patterns of DNA methylation can lead to plant developmental …

Epigenome plasticity in plants

JPB Lloyd, R Lister - Nature Reviews Genetics, 2022 - nature.com
Plant intra-individual and inter-individual variation can be determined by the epigenome, a
set of covalent modifications of DNA and chromatin that can alter genome structure and …

Araport11: a complete reannotation of the Arabidopsis thaliana reference genome

CY Cheng, V Krishnakumar, AP Chan… - The Plant …, 2017 - Wiley Online Library
The flowering plant Arabidopsis thaliana is a dicot model organism for research in many
aspects of plant biology. A comprehensive annotation of its genome paves the way for …

Defense priming: an adaptive part of induced resistance

B Mauch-Mani, I Baccelli, E Luna… - Annual review of plant …, 2017 - annualreviews.org
Priming is an adaptive strategy that improves the defensive capacity of plants. This
phenomenon is marked by an enhanced activation of induced defense mechanisms. Stimuli …

Small RNAs–big players in plant-microbe interactions

CY Huang, H Wang, P Hu, R Hamby, H Jin - Cell host & microbe, 2019 - cell.com
Eukaryotic small RNAs (sRNAs) are short non-coding regulatory molecules that induce RNA
interference (RNAi). During microbial infection, host RNAi machinery is highly regulated and …

Signaling mechanisms in pattern-triggered immunity (PTI)

J Bigeard, J Colcombet, H Hirt - Molecular plant, 2015 - cell.com
In nature, plants constantly have to face pathogen attacks. However, plant disease rarely
occurs due to efficient immune systems possessed by the host plants. Pathogens are …

Mechanisms to mitigate the trade-off between growth and defense

TL Karasov, E Chae, JJ Herman, J Bergelson - The Plant Cell, 2017 - academic.oup.com
Plants have evolved an array of defenses against pathogens. However, mounting a defense
response frequently comes with the cost of a reduction in growth and reproduction, carrying …

Transgenerational epigenetic inheritance: myths and mechanisms

E Heard, RA Martienssen - Cell, 2014 - cell.com
Since the human genome was sequenced, the term" epigenetics" is increasingly being
associated with the hope that we are more than just the sum of our genes. Might what we …