PI3K inhibitors: review and new strategies
M Zhang, H Jang, R Nussinov - Chemical science, 2020 - pubs.rsc.org
The search is on for effective specific inhibitors for PI3Kα mutants. PI3Kα, a critical lipid
kinase, has two subunits, catalytic and inhibitory. PIK3CA, the gene that encodes the p110α …
kinase, has two subunits, catalytic and inhibitory. PIK3CA, the gene that encodes the p110α …
Along the allostery stream: Recent advances in computational methods for allosteric drug discovery
D Ni, Z Chai, Y Wang, M Li, Z Yu, Y Liu… - Wiley …, 2022 - Wiley Online Library
Allostery is a universal, biological phenomenon in which orthosteric sites are fine‐tuned by
topologically distal allosteric sites triggered by perturbations, such as ligand binding, residue …
topologically distal allosteric sites triggered by perturbations, such as ligand binding, residue …
MutaBind2: predicting the impacts of single and multiple mutations on protein-protein interactions
N Zhang, Y Chen, H Lu, F Zhao, RV Alvarez… - Iscience, 2020 - cell.com
Missense mutations may affect proteostasis by destabilizing or over-stabilizing protein
complexes and changing the pathway flux. Predicting the effects of stabilizing mutations on …
complexes and changing the pathway flux. Predicting the effects of stabilizing mutations on …
Integrated computational approaches and tools for allosteric drug discovery
O Sheik Amamuddy, W Veldman, C Manyumwa… - International journal of …, 2020 - mdpi.com
Understanding molecular mechanisms underlying the complexity of allosteric regulation in
proteins has attracted considerable attention in drug discovery due to the benefits and …
proteins has attracted considerable attention in drug discovery due to the benefits and …
Allosteric drugs and mutations: chances, challenges, and necessity
E Guarnera, IN Berezovsky - Current opinion in structural biology, 2020 - Elsevier
Highlights•Allosteric drugs have become an indispensable tool in precision medicine.•Major
targets for allosteric drugs: diversity structures and functions.•Allosteric effects of mutations …
targets for allosteric drugs: diversity structures and functions.•Allosteric effects of mutations …
[HTML][HTML] Allostery: allosteric cancer drivers and innovative allosteric drugs
Here, we discuss the principles of allosteric activating mutations, propagation downstream of
the signals that they prompt, and allosteric drugs, with examples from the Ras signaling …
the signals that they prompt, and allosteric drugs, with examples from the Ras signaling …
Emergence of allosteric drug-resistance mutations: new challenges for allosteric drug discovery
Highlights•Allosteric drug discovery is gaining increasing attention.•Allosteric drug-
resistance mutations hamper the application of allosteric drugs.•We review the emergence …
resistance mutations hamper the application of allosteric drugs.•We review the emergence …
AlloSigMA 2: paving the way to designing allosteric effectors and to exploring allosteric effects of mutations
The AlloSigMA 2 server provides an interactive platform for exploring the allosteric signaling
caused by ligand binding and/or mutations, for analyzing the allosteric effects of mutations …
caused by ligand binding and/or mutations, for analyzing the allosteric effects of mutations …
DeepAlloDriver: a deep learning-based strategy to predict cancer driver mutations
Q Song, M Li, Q Li, X Lu, K Song, Z Zhang… - Nucleic acids …, 2023 - academic.oup.com
Driver mutations can contribute to the initial processes of cancer, and their identification is
crucial for understanding tumorigenesis as well as for molecular drug discovery and …
crucial for understanding tumorigenesis as well as for molecular drug discovery and …
Influence of disease-causing mutations on protein structural networks
VM Prabantu, N Naveenkumar… - Frontiers in Molecular …, 2021 - frontiersin.org
The interactions between residues in a protein tertiary structure can be studied effectively
using the approach of protein structure network (PSN). A PSN is a node-edge representation …
using the approach of protein structure network (PSN). A PSN is a node-edge representation …