Integrating adipocyte insulin signaling and metabolism in the multi-omics era
CM Calejman, WG Doxsey, DJ Fazakerley… - Trends in biochemical …, 2022 - cell.com
Insulin stimulates glucose uptake into adipocytes via mTORC2/AKT signaling and GLUT4
translocation and directs glucose carbons into glycolysis, glycerol for TAG synthesis, and de …
translocation and directs glucose carbons into glycolysis, glycerol for TAG synthesis, and de …
Signaling and gene expression in skeletal muscles in type 2 diabetes: current results and OMICS perspectives
AV Vorotnikov, DV Popov, PA Makhnovskii - Biochemistry (Moscow), 2022 - Springer
Skeletal muscles mainly contribute to the emergence of insulin resistance, impaired glucose
tolerance and the development of type 2 diabetes. Molecular mechanisms that regulate …
tolerance and the development of type 2 diabetes. Molecular mechanisms that regulate …
Trans-omic analysis reveals obesity-associated dysregulation of inter-organ metabolic cycles between the liver and skeletal muscle
Systemic metabolic homeostasis is regulated by inter-organ metabolic cycles involving
multiple organs. Obesity impairs inter-organ metabolic cycles, resulting in metabolic …
multiple organs. Obesity impairs inter-organ metabolic cycles, resulting in metabolic …
Transomics analysis reveals allosteric and gene regulation axes for altered hepatic glucose-responsive metabolism in obesity
Impaired glucose tolerance associated with obesity causes postprandial hyperglycemia and
can lead to type 2 diabetes. To study the differences in liver metabolism in healthy and …
can lead to type 2 diabetes. To study the differences in liver metabolism in healthy and …
Time-dependent cell-state selection identifies transiently expressed genes regulating ILC2 activation
Y Tanaka, M Yamagishi, Y Motomura… - Communications …, 2023 - nature.com
The decision of whether cells are activated or not is controlled through dynamic intracellular
molecular networks. However, the low population of cells during the transition state of …
molecular networks. However, the low population of cells during the transition state of …
Quantitative metabolic fluxes regulated by trans-omic networks
Cells change their metabolism in response to internal and external conditions by regulating
the trans-omic network, which is a global biochemical network with multiple omic layers …
the trans-omic network, which is a global biochemical network with multiple omic layers …
[HTML][HTML] Multi-omics-based label-free metabolic flux inference reveals obesity-associated dysregulatory mechanisms in liver glucose metabolism
Glucose homeostasis is maintained by modulation of metabolic flux. Enzymes and
metabolites regulate the involved metabolic pathways. Dysregulation of glucose …
metabolites regulate the involved metabolic pathways. Dysregulation of glucose …
An extensive and dynamic trans-omic network illustrating prominent regulatory mechanisms in response to insulin in the liver
F Matsuzaki, S Uda, Y Yamauchi, M Matsumoto… - Cell Reports, 2021 - cell.com
An effective combination of multi-omic datasets can enhance our understanding of complex
biological phenomena. To build a context-dependent network with multiple omic layers, ie, a …
biological phenomena. To build a context-dependent network with multiple omic layers, ie, a …
Optogenetic decoding of Akt2-regulated metabolic signaling pathways in skeletal muscle cells using transomics analysis
G Kawamura, T Kokaji, K Kawata, Y Sekine… - Science …, 2023 - science.org
Insulin regulates various cellular metabolic processes by activating specific isoforms of the
Akt family of kinases. Here, we elucidated metabolic pathways that are regulated in an Akt2 …
Akt family of kinases. Here, we elucidated metabolic pathways that are regulated in an Akt2 …
Microscopic image-based classification of adipocyte differentiation by machine learning
Y Noguchi, M Murakami, M Murata, F Kano - Histochemistry and Cell …, 2023 - Springer
Adipocyte differentiation is a sequential process involving increased expression of
peroxisome proliferator-activated receptor gamma (PPARγ), adipocyte-specific gene …
peroxisome proliferator-activated receptor gamma (PPARγ), adipocyte-specific gene …