[HTML][HTML] Analysis of meristems and plant regeneration at single-cell resolution

RY Liao, JW Wang - Current opinion in plant biology, 2023 - Elsevier
Rapid development of high-throughput single-cell RNA sequencing (scRNA-seq)
technologies offers exciting opportunities to reveal new and rare cell types, previously …

[HTML][HTML] Lost in space: what single-cell RNA sequencing cannot tell you

K Adema, MA Schon, MD Nodine, W Kohlen - Trends in Plant Science, 2024 - cell.com
Plant scientists are rapidly integrating single-cell RNA sequencing (scRNA-seq) into their
workflows. Maximizing the potential of scRNA-seq requires a proper understanding of the …

Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics

C Grones, T Eekhout, D Shi, M Neumann… - The Plant …, 2024 - academic.oup.com
Single-cell and single-nucleus RNA-sequencing technologies capture the expression of
plant genes at an unprecedented resolution. Therefore, these technologies are gaining …

[HTML][HTML] From procambium patterning to cambium activation and maintenance in the Arabidopsis root

X Wang, R Mäkilä, AP Mähönen - Current Opinion in Plant Biology, 2023 - Elsevier
In addition to primary growth, which elongates the plant body, many plant species also
undergo secondary growth to thicken their body. During primary vascular development, a …

[HTML][HTML] Systems biology of root development in Populus: Review and perspectives

AH Ahkami - Plant Science, 2023 - Elsevier
The root system of plants consists of primary, lateral, and adventitious roots (ARs)(aka shoot-
born roots). ARs arise from stem-or leaf-derived cells during post-embryonic development …

Single‐cell transcriptomic analysis of pea shoot development and cell‐type‐specific responses to boron deficiency

X Chen, Y Ru, H Takahashi, M Nakazono… - The Plant …, 2024 - Wiley Online Library
Understanding how nutrient stress impacts plant growth is fundamentally important to the
development of approaches to improve crop production under nutrient limitation. Here we …

[HTML][HTML] The single-cell transcriptome program of nodule development cellular lineages in Medicago truncatula

WJ Pereira, J Boyd, D Conde, PM Triozzi, KM Balmant… - Cell Reports, 2024 - cell.com
Legumes establish a symbiotic relationship with nitrogen-fixing rhizobia by developing
nodules. Nodules are modified lateral roots that undergo changes in their cellular …

Single-cell transcriptomics reveals heterogeneity in plant responses to the environment: a focus on biotic and abiotic interactions

R Tenorio Berrío, M Dubois - Journal of Experimental Botany, 2024 - academic.oup.com
Biotic and abiotic environmental cues are major factors influencing plant growth and
productivity. Interactions with biotic (eg symbionts and pathogens) and abiotic (eg changes …

Bringing CAM photosynthesis to the table: Paving the way for resilient and productive agricultural systems in a changing climate

N Perron, M Kirst, S Chen - Plant Communications, 2023 - cell.com
Modern agricultural systems are directly threatened by global climate change and the
resulting freshwater crisis. A considerable challenge in the coming years will be to develop …

What Is a Plant Cell Type in the Age of Single-Cell Biology? It's Complicated

B Rusnak, FK Clark, BVL Vadde… - Annual Review of Cell …, 2024 - annualreviews.org
One of the fundamental questions in developmental biology is how a cell is specified to
differentiate as a specialized cell type. Traditionally, plant cell types were defined based on …