Transient protein-protein interactions: structural, functional, and network properties

JR Perkins, I Diboun, BH Dessailly, JG Lees, C Orengo - Structure, 2010 - cell.com
Transient interactions, which involve protein interactions that are formed and broken easily,
are important in many aspects of cellular function. Here we describe structural and functional …

Crystal contacts as nature's docking solutions

E Krissinel - Journal of computational chemistry, 2010 - Wiley Online Library
The assumption that crystal contacts reflect natural macromolecular interactions makes a
basis for many studies in structural biology. However, the crystal state may correspond to a …

Vibrational Stark Effect Spectroscopy at the Interface of Ras and Rap1A Bound to the Ras Binding Domain of RalGDS Reveals an Electrostatic Mechanism for Protein …

AJ Stafford, DL Ensign, LJ Webb - The Journal of Physical …, 2010 - ACS Publications
Electrostatic fields at the interface of the Ras binding domain of the protein Ral guanine
nucleotide dissociation stimulator (RalGDS) with the structurally analogous GTPases Ras …

[PDF][PDF] Macromolecular complexes in crystals and solutions

E Krissinel - Acta Crystallographica Section D: Biological …, 2011 - journals.iucr.org
This paper presents a discussion of existing methods for the analysis of macromolecular
interactions and complexes in crystal packing. Typical situations and conditions where …

An insecticidal GroEL protein with chitin binding activity from Xenorhabdus nematophila

MC Joshi, A Sharma, S Kant, A Birah, GP Gupta… - Journal of Biological …, 2008 - ASBMB
Xenorhabdus nematophila secretes insecticidal proteins to kill its larval prey. We have
isolated an∼ 58-kDa GroEL homolog, secreted in the culture medium through outer …

Proteoliposomal formulations of an HIV-1 gp41-based miniprotein elicit a lipid-dependent immunodominant response overlapping the 2F5 binding motif

LM Molinos-Albert, E Bilbao, L Agulló, S Marfil… - Scientific reports, 2017 - nature.com
Abstract The HIV-1 gp41 Membrane Proximal External Region (MPER) is recognized by
broadly neutralizing antibodies and represents a promising vaccine target. However, MPER …

Acetylcholinesterase‐R increases germ cell apoptosis but enhances sperm motility

I Mor, EH Sklan, E Podoly, M Pick… - Journal of cellular …, 2008 - Wiley Online Library
Abstract Changes in protein subdomains through alternative splicing often modify protein‐
protein interactions, altering biological processes. A relevant example is that of the stress …

Characterization of interfacial solvent in protein complexes and contribution of wet spots to the interface description

J Teyra, MT Pisabarro - Proteins: Structure, Function, and …, 2007 - Wiley Online Library
Water networks in protein interfaces can complement direct interactions contributing
significantly to molecular recognition, function, and stability of protein association. Thus …

Drug Targets for Cell Cycle Dysregulators in Leukemogenesis: In Silico Docking Studies

A Jayaraman, K Jamil - PLoS One, 2014 - journals.plos.org
Alterations in cell cycle regulating proteins are a key characteristic in neoplastic proliferation
of lymphoblast cells in patients with Acute Lymphoblastic Leukemia (ALL). The aim of our …

On the relationship between catalytic residues and their protein contact number

SW Huang, SH Yu, CH Shih, HW Guan… - Current Protein and …, 2011 - ingentaconnect.com
Due to advances in structural biology, an increasing number of protein structures of
unknown function have been deposited in Protein Data Bank (PDB). These proteins are …