Post-translational modifications of histones that influence nucleosome dynamics

GD Bowman, MG Poirier - Chemical reviews, 2014 - ACS Publications
Nucleosomes are efficient DNA-packaging units. The fundamental protein unit of the
nucleosome is the histone dimer, a simple α-helical domain possessing a highly basic …

Chromatin and transcription in yeast

OJ Rando, F Winston - Genetics, 2012 - academic.oup.com
Understanding the mechanisms by which chromatin structure controls eukaryotic
transcription has been an intense area of investigation for the past 25 years. Many of the key …

Structure of complete Pol II–DSIF–PAF–SPT6 transcription complex reveals RTF1 allosteric activation

SM Vos, L Farnung, A Linden, H Urlaub… - Nature Structural & …, 2020 - nature.com
Transcription by RNA polymerase II (Pol II) is carried out by an elongation complex. We
previously reported an activated porcine Pol II elongation complex, EC*, encompassing the …

Chromatin remodelers: We are the drivers!!

M Tyagi, N Imam, K Verma, AK Patel - Nucleus, 2016 - Taylor & Francis
Chromatin is a highly dynamic structure that imparts structural organization to the genome
and regulates the gene expression underneath. The decade long research in deciphering …

The Paf1 complex: a keystone of nuclear regulation operating at the interface of transcription and chromatin

AM Francette, SA Tripplehorn, KM Arndt - Journal of molecular biology, 2021 - Elsevier
The regulation of transcription by RNA polymerase II is closely intertwined with the
regulation of chromatin structure. A host of proteins required for the disassembly …

Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange

M Smolle, S Venkatesh, MM Gogol, H Li… - Nature structural & …, 2012 - nature.com
Set2-mediated methylation of histone H3 Lys36 (H3K36) is a mark associated with the
coding sequences of actively transcribed genes, but it has a negative role during …

Emerging insights into the roles of the Paf1 complex in gene regulation

SB Van Oss, CE Cucinotta, KM Arndt - Trends in biochemical sciences, 2017 - cell.com
The conserved, multifunctional Polymerase-Associated Factor 1 complex (Paf1C) regulates
all stages of the RNA polymerase (Pol) II transcription cycle. In this review, we examine a …

The Paf1 complex: platform or player in RNA polymerase II transcription?

JA Jaehning - Biochimica et Biophysica Acta (BBA)-Gene Regulatory …, 2010 - Elsevier
The Paf1 complex (Paf1C), composed of the proteins Paf1, Ctr9, Cdc73, Rtf1, and Leo1,
accompanies RNA polymerase II (pol II) from the promoter to the 3′ end formation site of …

[HTML][HTML] The human PAF1 complex acts in chromatin transcription elongation both independently and cooperatively with SII/TFIIS

J Kim, M Guermah, RG Roeder - Cell, 2010 - cell.com
Genetic and cell-based studies have implicated the PAF1 complex (PAF1C) in transcription-
associated events, but there has been no evidence showing a direct role in facilitating …

Nucleosome recognition and DNA distortion by the Chd1 remodeler in a nucleotide-free state

IM Nodelman, S Das, AM Faustino, SD Fried… - Nature structural & …, 2022 - nature.com
Chromatin remodelers are ATP-dependent enzymes that reorganize nucleosomes within all
eukaryotic genomes. Here we report a complex of the Chd1 remodeler bound to a …