Non-coding RNAs and their roles in stress response in plants
Eukaryotic genomes encode thousands of non-coding RNAs (ncRNAs), which play crucial
roles in transcriptional and post-transcriptional regulation of gene expression. Accumulating …
roles in transcriptional and post-transcriptional regulation of gene expression. Accumulating …
Experimental strategies for microRNA target identification
MicroRNAs (miRNAs) are important regulators of eukaryotic gene expression in most
biological processes. They act by guiding the RNAi-induced silencing complex (RISC) to …
biological processes. They act by guiding the RNAi-induced silencing complex (RISC) to …
miRDeepFinder: a miRNA analysis tool for deep sequencing of plant small RNAs
Abstract miRDeepFinder is a software package developed to identify and functionally
analyze plant microRNAs (miRNAs) and their targets from small RNA datasets obtained from …
analyze plant microRNAs (miRNAs) and their targets from small RNA datasets obtained from …
MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
Legumes and many nonleguminous plants enter symbiotic interactions with microbes, and it
is poorly understood how host plants respond to promote beneficial, symbiotic microbial …
is poorly understood how host plants respond to promote beneficial, symbiotic microbial …
MicroRNA regulation of plant innate immune receptors
F Li, D Pignatta, C Bendix… - Proceedings of the …, 2012 - National Acad Sciences
Plant genomes contain large numbers of cell surface leucine-rich repeat (LRR) and
intracellular nucleotide binding (NB)-LRR immune receptors encoded by resistance (R) …
intracellular nucleotide binding (NB)-LRR immune receptors encoded by resistance (R) …
starBase: a database for exploring microRNA–mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data
MicroRNAs (miRNAs) represent an important class of small non-coding RNAs (sRNAs) that
regulate gene expression by targeting messenger RNAs. However, assigning miRNAs to …
regulate gene expression by targeting messenger RNAs. However, assigning miRNAs to …
PsRobot: a web-based plant small RNA meta-analysis toolbox
Small RNAs (smRNAs) in plants, mainly microRNAs and small interfering RNAs, play
important roles in both transcriptional and post-transcriptional gene regulation. The broad …
important roles in both transcriptional and post-transcriptional gene regulation. The broad …
PmiREN: a comprehensive encyclopedia of plant miRNAs
Z Guo, Z Kuang, Y Wang, Y Zhao, Y Tao… - Nucleic acids …, 2020 - academic.oup.com
MicroRNAs (miRNAs) are small non-coding RNA molecules that function as diverse
endogenous gene regulators at the post-transcriptional level. In the past two decades, as …
endogenous gene regulators at the post-transcriptional level. In the past two decades, as …
Spatiotemporally dynamic, cell-type–dependent premeiotic and meiotic phasiRNAs in maize anthers
Maize anthers, the male reproductive floral organs, express two classes of phased small-
interfering RNAs (phasiRNAs). PhasiRNA precursors are transcribed by RNA polymerase II …
interfering RNAs (phasiRNAs). PhasiRNA precursors are transcribed by RNA polymerase II …
The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea
Seagrasses colonized the sea on at least three independent occasions to form the basis of
one of the most productive and widespread coastal ecosystems on the planet. Here we …
one of the most productive and widespread coastal ecosystems on the planet. Here we …