Readthrough compounds for nonsense mutations: bridging the translational gap

S Spelier, EPM van Doorn, CK van der Ent… - Trends in molecular …, 2023 - cell.com
Approximately 10% of all pathological mutations are nonsense mutations that are
responsible for several severe genetic diseases for which no treatment regimens are …

[HTML][HTML] Cell models for Alzheimer's and Parkinson's disease: At the interface of biology and drug discovery

S Cetin, D Knez, S Gobec, J Kos, A Pišlar - Biomedicine & …, 2022 - Elsevier
Neurodegenerative diseases are severely debilitating conditions characterized primarily by
progressive neuronal loss and impairment of the nervous system. Alzheimer's and …

ASD2023: towards the integrating landscapes of allosteric knowledgebase

J He, X Liu, C Zhu, J Zha, Q Li, M Zhao… - Nucleic Acids …, 2024 - academic.oup.com
Allosteric regulation, induced by perturbations at an allosteric site topographically distinct
from the orthosteric site, is one of the most direct and efficient ways to fine-tune …

The latest automated docking technologies for novel drug discovery

J Caballero - Expert opinion on drug discovery, 2021 - Taylor & Francis
Introduction Molecular docking has been consolidated as one of the most important methods
in the molecular modeling field. It has been recognized as a prominent tool in the study of …

The effect of a methyl group on structure and function: Serine vs. threonine glycosylation and phosphorylation

JJ Barchi Jr, CN Strain - Frontiers in Molecular Biosciences, 2023 - frontiersin.org
A variety of glycan structures cover the surface of all cells and are involved in myriad
biological processes, including but not limited to, cell adhesion and communication, protein …

[HTML][HTML] Targeting protein-protein interaction interfaces in COVID-19 drug discovery

C Chang, SM Lin, R Satange, SC Lin, SC Sun… - Computational and …, 2021 - Elsevier
To date, the COVID-19 pandemic has claimed over 1 million human lives, infected another
50 million individuals and wreaked havoc on the global economy. The crisis has spurred the …

Ligand‐centered assessment of SARS‐CoV‐2 drug target models in the Protein Data Bank

A Wlodawer, Z Dauter, IG Shabalin, M Gilski… - The FEBS …, 2020 - Wiley Online Library
A bright spot in the SARS‐CoV‐2 (CoV‐2) coronavirus pandemic has been the immediate
mobilization of the biomedical community, working to develop treatments and vaccines for …

Library design strategies to accelerate fragment‐based drug discovery

NS Troelsen, MH Clausen - Chemistry–A European Journal, 2020 - Wiley Online Library
Fragment‐based drug discovery (FBDD) has become an established approach for the
generation of early lead candidates. However, despite its success and inherent advantages …

SMMPPI: a machine learning-based approach for prediction of modulators of protein–protein interactions and its application for identification of novel inhibitors for …

P Gupta, D Mohanty - Briefings in bioinformatics, 2021 - academic.oup.com
Small molecule modulators of protein–protein interactions (PPIs) are being pursued as
novel anticancer, antiviral and antimicrobial drug candidates. We have utilized a large data …

Electrostatic interactions dictate bile salt hydrolase substrate preference

KP Malarney, PV Chang - Biochemistry, 2023 - ACS Publications
The human intestines are colonized by trillions of microbes, comprising the gut microbiota,
which produce diverse small molecule metabolites and modify host metabolites, such as bile …