Molecular epidemiology and diagnostics of KRAS mutations in human cancer

J Timar, K Kashofer - Cancer and Metastasis Reviews, 2020 - Springer
RAS mutation is the most frequent oncogenic alteration in human cancers. KRAS is the most
frequently mutated followed by NRAS. The emblematic KRAS mutant cancers are …

[HTML][HTML] Multi-omics approaches in cancer research with applications in tumor subtyping, prognosis, and diagnosis

O Menyhárt, B Győrffy - Computational and structural biotechnology journal, 2021 - Elsevier
While cost-effective high-throughput technologies provide an increasing amount of data, the
analyses of single layers of data seldom provide causal relations. Multi-omics data …

Transcriptome‐level discovery of survival‐associated biomarkers and therapy targets in non‐small‐cell lung cancer

B Győrffy - British Journal of Pharmacology, 2024 - Wiley Online Library
Abstract Background and Purpose Survival rate of patients with lung cancer has increased
by over 60% in the recent two decades. With longer survival, the identification of genes …

Drug resistance in non-small cell lung cancer: a potential for NOTCH targeting?

V Sosa Iglesias, L Giuranno, LJ Dubois, J Theys… - Frontiers in …, 2018 - frontiersin.org
Drug resistance is a major cause for therapeutic failure in non-small cell lung cancer
(NSCLC) leading to tumor recurrence and disease progression. Cell intrinsic mechanisms of …

[HTML][HTML] KRAS signaling enriched triple negative breast cancer is associated with favorable tumor immune microenvironment and better survival

Y Tokumaru, M Oshi, E Katsuta, L Yan… - American journal of …, 2020 - ncbi.nlm.nih.gov
KRAS signaling is associated with cancer progression in several cancers. Upregulation of
KRAS signaling is often seen in cancers that harbor high KRAS mutation rate, such as …

muTarget: a platform linking gene expression changes and mutation status in solid tumors

Á Nagy, B Győrffy - International journal of cancer, 2021 - Wiley Online Library
Large oncology repositories have paired genomic and transcriptomic data for all patients.
We used these data to perform two independent analyses: to identify gene expression …

Assessment of spatial transcriptomics for oncology discovery

A Lyubetskaya, B Rabe, A Fisher, A Lewin… - Cell Reports …, 2022 - cell.com
Tumor heterogeneity is a major challenge for oncology drug discovery and development.
Understanding of the spatial tumor landscape is key to identifying new targets and impactful …

[HTML][HTML] On target: Rational approaches to KRAS inhibition for treatment of non-small cell lung carcinoma

CR Lindsay, MC Garassino, E Nadal, K Öhrling… - Lung Cancer, 2021 - Elsevier
Non-small cell lung carcinoma (NSCLC) is a leading cause of cancer death. Approximately
one-third of patients with NSCLC have a KRAS mutation. KRAS G12C, the most common …

Integrated analysis of public datasets for the discovery and validation of survival-associated genes in solid tumors

B Győrffy - The Innovation, 2024 - cell.com
Identifying genes with prognostic significance that can act as biomarkers in solid tumors can
help stratify patients and uncover novel therapy targets. Here, our goal was to expand our …

Comprehensive outline of whole exome sequencing data analysis tools available in clinical oncology

Á Bartha, B Győrffy - Cancers, 2019 - mdpi.com
Whole exome sequencing (WES) enables the analysis of all protein coding sequences in
the human genome. This technology enables the investigation of cancer-related genetic …