Experimental design, population dynamics, and diversity in microbial experimental evolution

B Van den Bergh, T Swings, M Fauvart… - … and Molecular Biology …, 2018 - Am Soc Microbiol
In experimental evolution, laboratory-controlled conditions select for the adaptation of
species, which can be monitored in real time. Despite the current popularity of such …

The molecular basis for life in extreme environments

N Ando, B Barquera, DH Bartlett, E Boyd… - Annual review of …, 2021 - annualreviews.org
Sampling and genomic efforts over the past decade have revealed an enormous quantity
and diversity of life in Earth's extreme environments. This new knowledge of life on Earth …

Biosensor-driven adaptive laboratory evolution of l-valine production in Corynebacterium glutamicum

R Mahr, C Gätgens, J Gätgens, T Polen… - Metabolic …, 2015 - Elsevier
Adaptive laboratory evolution has proven a valuable strategy for metabolic engineering.
Here, we established an experimental evolution approach for improving microbial …

Engineered microbial biofuel production and recovery under supercritical carbon dioxide

JT Boock, AJE Freedman, GA Tompsett… - Nature …, 2019 - nature.com
Culture contamination, end-product toxicity, and energy efficient product recovery are long-
standing bioprocess challenges. To solve these problems, we propose a high-pressure …

Development of Freeze-Thaw Tolerant Lactobacillus rhamnosus GG by Adaptive Laboratory Evolution

YW Kwon, JH Bae, SA Kim, NS Han - Frontiers in Microbiology, 2018 - frontiersin.org
The industrial application of microorganisms as starters or probiotics requires their
preservation to assure viability and metabolic activity. Freezing is routinely used for this …

Current state of athalassohaline deep‐sea hypersaline anoxic basin research—recommendations for future work and relevance to astrobiology

LA Fisher, A Pontefract, SM Som… - Environmental …, 2021 - Wiley Online Library
Deep‐sea hypersaline anoxic basins (DHABs) are uniquely stratified polyextreme
environments generally found in enclosed seas. These environments select for elusive and …

Zinc effects on bacteria: insights from Escherichia coli by multi-omics approach

M Rihacek, L Kosaristanova, T Fialova, M Kuthanova… - Msystems, 2023 - Am Soc Microbiol
In this study, we investigated the impact of zinc oxide (ZnO) and zinc oxide nanoparticles
(ZnONPs) on Escherichia coli. These compounds are commonly used as fertilizers and feed …

Enhancing the adaptability of the deep-sea bacterium Shewanella piezotolerans WP3 to high pressure and low temperature by experimental evolution under H2O2 …

Z Xie, H Jian, Z Jin, X Xiao - Applied and Environmental …, 2018 - Am Soc Microbiol
Oxidative stresses commonly exist in natural environments, and microbes have developed a
variety of defensive systems to counteract such events. Although increasing evidence has …

Biological functions at high pressure: transcriptome response of Shewanella oneidensis MR-1 to hydrostatic pressure relevant to Titan and other icy ocean worlds

J Malas, DC Russo, O Bollengier, MJ Malaska… - Frontiers in …, 2024 - frontiersin.org
High hydrostatic pressure (HHP) is a key driver of life's evolution and diversification on
Earth. Icy moons such as Titan, Europa, and Enceladus harbor potentially habitable high …

The effect of hydrostatic pressure on the activity and community composition of hydrocarbon-degrading bacteria in Arctic seawater

A Marietou, JS Schmidt, MR Rasmussen… - Applied and …, 2023 - Am Soc Microbiol
There is a renewed interest in hydrocarbon biodegradation in Arctic seawaters due to
increasing ship traffic and risk for oil spills. Most studies, however, fail to address the effect of …