Release mechanisms of major DAMPs

A Murao, M Aziz, H Wang, M Brenner, P Wang - Apoptosis, 2021 - Springer
Damage-associated molecular patterns (DAMPs) are endogenous molecules which foment
inflammation and are associated with disorders in sepsis and cancer. Thus, therapeutically …

[HTML][HTML] CRISPR/Cas9-based engineering of the epigenome

J Pulecio, N Verma, E Mejía-Ramírez, D Huangfu… - Cell stem cell, 2017 - cell.com
Determining causal relationships between distinct chromatin features and gene expression,
and ultimately cell behavior, remains a major challenge. Recent developments in targetable …

The return of the nucleus: transcriptional and epigenetic control of autophagy

J Füllgrabe, DJ Klionsky, B Joseph - Nature reviews Molecular cell …, 2014 - nature.com
Autophagy is a conserved process by which cytoplasmic components are degraded by the
lysosome. It is commonly seen as a cytoplasmic event and, until now, nuclear events were …

What is code biology?

M Barbieri - Biosystems, 2018 - Elsevier
Various independent discoveries have shown that many organic codes exist in living
systems, and this implies that they came into being during the history of life and contributed …

Cell death in the pathogenesis of systemic lupus erythematosus and lupus nephritis

P Mistry, MJ Kaplan - Clinical Immunology, 2017 - Elsevier
Nephritis is one of the most severe complications of systemic lupus erythematosus (SLE).
One key characteristic of lupus nephritis (LN) is the deposition of immune complexes …

Biophysical regulation of chromatin architecture instills a mechanical memory in mesenchymal stem cells

SJ Heo, SD Thorpe, TP Driscoll, RL Duncan, DA Lee… - Scientific reports, 2015 - nature.com
Mechanical cues direct the lineage commitment of mesenchymal stem cells (MSCs). In this
study, we identified the operative molecular mechanisms through which dynamic tensile …

Brillouin light scattering anisotropy microscopy for imaging the viscoelastic anisotropy in living cells

H Keshmiri, D Cikes, M Samalova, L Schindler… - Nature …, 2024 - nature.com
Maintaining and modulating mechanical anisotropy is essential for biological processes.
However, how this is achieved at the microscopic scale in living soft matter is not always …

Histone onco-modifications

J Füllgrabe, E Kavanagh, B Joseph - Oncogene, 2011 - nature.com
Post-translational modification of histones provides an important regulatory platform for
processes such as gene expression, DNA replication and repair, chromosome condensation …

Code biology–A new science of life

M Barbieri - Biosemiotics, 2012 - Springer
Abstract Systems Biology and the Modern Synthesis are recent versions of two classical
biological paradigms that are known as structuralism and functionalism, or internalism and …

The histone H4 lysine 16 acetyltransferase hMOF regulates the outcome of autophagy

J Füllgrabe, MA Lynch-Day, N Heldring, W Li… - Nature, 2013 - nature.com
Autophagy is an evolutionarily conserved catabolic process involved in several
physiological and pathological processes,. Although primarily cytoprotective, autophagy can …