Functional mechanisms of microsatellite DNA in eukaryotic genomes
ATM Bagshaw - Genome biology and evolution, 2017 - academic.oup.com
Microsatellite repeat DNA is best known for its length mutability, which is implicated in
several neurological diseases and cancers, and often exploited as a genetic marker. Less …
several neurological diseases and cancers, and often exploited as a genetic marker. Less …
High-throughput techniques enable advances in the roles of DNA and RNA secondary structures in transcriptional and post-transcriptional gene regulation
The most stable structure of DNA is the canonical right-handed double helix termed B DNA.
However, certain environments and sequence motifs favor alternative conformations, termed …
However, certain environments and sequence motifs favor alternative conformations, termed …
Microsatellite tandem repeats are abundant in human promoters and are associated with regulatory elements
Tandem repeats are genomic elements that are prone to changes in repeat number and are
thus often polymorphic. These sequences are found at a high density at the start of human …
thus often polymorphic. These sequences are found at a high density at the start of human …
Massive variation of short tandem repeats with functional consequences across strains of Arabidopsis thaliana
Short tandem repeat (STR) mutations may comprise more than half of the mutations in
eukaryotic coding DNA, yet STR variation is rarely examined as a contributor to complex …
eukaryotic coding DNA, yet STR variation is rarely examined as a contributor to complex …
Novel implications of a strictly monomorphic (GCC) repeat in the human PRKACB gene
S Khamse, Z Jafarian, A Bozorgmehr, M Tavakoli… - Scientific reports, 2021 - nature.com
Abstract PRKACB (Protein Kinase CAMP-Activated Catalytic Subunit Beta) is predominantly
expressed in the brain, and regulation of this gene links to neuroprotective effects against …
expressed in the brain, and regulation of this gene links to neuroprotective effects against …
Exceptional expansion and conservation of a CT‐repeat complex in the core promoter of PAXBP1 in primates
S Mohammadparast, H Bayat… - American journal of …, 2014 - Wiley Online Library
Adaptive evolution may be linked with the genomic distribution and function of short tandem
repeats (STRs). Proximity of the core promoter STRs to the+ 1 transcription start site (TSS) …
repeats (STRs). Proximity of the core promoter STRs to the+ 1 transcription start site (TSS) …
Quality and quantity of genetic relatedness data affect the analysis of social structure
Kinship plays a fundamental role in the evolution of social systems and is considered a key
driver of group living. To understand the role of kinship in the formation and maintenance of …
driver of group living. To understand the role of kinship in the formation and maintenance of …
Core promoter short tandem repeats as evolutionary switch codes for primate speciation
M Ohadi, E Valipour… - American journal of …, 2015 - Wiley Online Library
Alteration in gene expression levels underlies many of the phenotypic differences across
species. Because of their highly mutable nature, proximity to the+ 1 transcription start site …
species. Because of their highly mutable nature, proximity to the+ 1 transcription start site …
STaRRRT: a table of short tandem repeats in regulatory regions of the human genome
Abstract Background Tandem repeats (TRs) are unstable regions commonly found within
genomes that have consequences for evolution and disease. In humans, polymorphic TRs …
genomes that have consequences for evolution and disease. In humans, polymorphic TRs …
Functional variations modulating PRKCA expression and alternative splicing predispose to multiple sclerosis
EM Paraboschi, V Rimoldi, G Solda… - Human molecular …, 2014 - academic.oup.com
The protein kinase C alpha (PRKCA) gene, encoding a Th17-cell-selective kinase, was
repeatedly associated with multiple sclerosis (MS), but the underlying pathogenic …
repeatedly associated with multiple sclerosis (MS), but the underlying pathogenic …