Network regulation of microRNA biogenesis and target interaction

S Komatsu, H Kitai, HI Suzuki - Cells, 2023 - mdpi.com
MicroRNAs (miRNAs) are versatile, post-transcriptional regulators of gene expression.
Canonical miRNAs are generated through the two-step DROSHA-and DICER-mediated …

Systems and synthetic microRNA biology: from biogenesis to disease pathogenesis

H Matsuyama, HI Suzuki - International journal of molecular sciences, 2019 - mdpi.com
MicroRNAs (miRNAs) are approximately 22-nucleotide-long, small non-coding RNAs that
post-transcriptionally regulate gene expression. The biogenesis of miRNAs involves multiple …

The regulatory impact of RNA-binding proteins on microRNA targeting

S Kim, S Kim, HR Chang, D Kim, J Park, N Son… - Nature …, 2021 - nature.com
Argonaute is the primary mediator of metazoan miRNA targeting (MT). Among the currently
identified> 1,500 human RNA-binding proteins (RBPs), there are only a handful of RBPs …

MicroRNA control of TGF-β signaling

HI Suzuki - International journal of molecular sciences, 2018 - mdpi.com
Transcriptional and post-transcriptional regulation shapes the transcriptome and proteome
changes induced by various cellular signaling cascades. MicroRNAs (miRNAs) are small …

Gain-of-function mutation of microRNA-140 in human skeletal dysplasia

G Grigelioniene, HI Suzuki, F Taylan… - Nature medicine, 2019 - nature.com
MicroRNAs (miRNAs) are post-transcriptional regulators of gene expression. Heterozygous
loss-of-function point mutations of miRNA genes are associated with several human …

Non-coding transcript variants of protein-coding genes–what are they good for?

S Dhamija, MB Menon - RNA biology, 2018 - Taylor & Francis
The total number of protein-coding genes in the human genome is not significantly higher
than those in much simpler eukaryotes, despite a general increase in genome size …

Silencing of Pyruvate Kinase M2 via a Metal–Organic Framework Based Theranostic Gene Nanomedicine for Triple-Negative Breast Cancer Therapy

S Huang, W Zhu, F Zhang, G Chen, X Kou… - … Applied Materials & …, 2021 - ACS Publications
Triple-negative breast cancer (TNBC) is typically associated with poor prognosis due to its
only partial response to chemotherapy and lack of clinically established targeted therapies …

Roles of microRNAs in disease biology

HI Suzuki - JMA journal, 2023 - jstage.jst.go.jp
Gene regulation by microRNAs (miRNAs) plays important roles in development, physiology,
and disease. miRNAs are an abundant class of noncoding RNAs that are generated through …

Global approaches in studying RNA-binding protein interaction networks

EL Sternburg, FV Karginov - Trends in biochemical sciences, 2020 - cell.com
RNA-binding proteins (RBPs) play crucial roles in almost all aspects of cellular biology. RBP
binding at specific target sites impacts expression of functionally coordinated sets of mRNAs …

Systematic characterization of seed overlap microRNA cotargeting associated with lupus pathogenesis

H Kitai, N Kato, K Ogami, S Komatsu, Y Watanabe… - BMC biology, 2022 - Springer
Background Combinatorial gene regulation by multiple microRNAs (miRNAs) is widespread
and closely spaced target sites often act cooperatively to achieve stronger repression …