[HTML][HTML] Clinical information extraction applications: a literature review
Background With the rapid adoption of electronic health records (EHRs), it is desirable to
harvest information and knowledge from EHRs to support automated systems at the point of …
harvest information and knowledge from EHRs to support automated systems at the point of …
Natural language processing in radiology: a systematic review
Radiological reporting has generated large quantities of digital content within the electronic
health record, which is potentially a valuable source of information for improving clinical care …
health record, which is potentially a valuable source of information for improving clinical care …
PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability
JC Kirby, P Speltz, LV Rasmussen… - Journal of the …, 2016 - academic.oup.com
Objective Health care generated data have become an important source for clinical and
genomic research. Often, investigators create and iteratively refine phenotype algorithms to …
genomic research. Often, investigators create and iteratively refine phenotype algorithms to …
Advances in electronic phenotyping: from rule-based definitions to machine learning models
JM Banda, M Seneviratne… - Annual review of …, 2018 - annualreviews.org
With the widespread adoption of electronic health records (EHRs), large repositories of
structured and unstructured patient data are becoming available to conduct observational …
structured and unstructured patient data are becoming available to conduct observational …
[HTML][HTML] Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: the SHARPn project
The Strategic Health IT Advanced Research Projects (SHARP) Program, established by the
Office of the National Coordinator for Health Information Technology in 2010 supports …
Office of the National Coordinator for Health Information Technology in 2010 supports …
Portability of an algorithm to identify rheumatoid arthritis in electronic health records
RJ Carroll, WK Thompson, AE Eyler… - Journal of the …, 2012 - academic.oup.com
Objectives Electronic health records (EHR) can allow for the generation of large cohorts of
individuals with given diseases for clinical and genomic research. A rate-limiting step is the …
individuals with given diseases for clinical and genomic research. A rate-limiting step is the …
[HTML][HTML] Chapter 13: Mining electronic health records in the genomics era
JC Denny - PLoS computational biology, 2012 - journals.plos.org
The combination of improved genomic analysis methods, decreasing genotyping costs, and
increasing computing resources has led to an explosion of clinical genomic knowledge in …
increasing computing resources has led to an explosion of clinical genomic knowledge in …
[HTML][HTML] An information extraction framework for cohort identification using electronic health records
Abstract Information extraction (IE), a natural language processing (NLP) task that
automatically extracts structured or semi-structured information from free text, has become …
automatically extracts structured or semi-structured information from free text, has become …
Using natural language processing to improve efficiency of manual chart abstraction in research: the case of breast cancer recurrence
DS Carrell, S Halgrim, DT Tran… - American journal of …, 2014 - academic.oup.com
The increasing availability of electronic health records (EHRs) creates opportunities for
automated extraction of information from clinical text. We hypothesized that natural language …
automated extraction of information from clinical text. We hypothesized that natural language …
[HTML][HTML] Healthprompt: A zero-shot learning paradigm for clinical natural language processing
S Sivarajkumar, Y Wang - AMIA Annual Symposium Proceedings, 2022 - ncbi.nlm.nih.gov
Developing clinical natural language systems based on machine learning and deep
learning is dependent on the availability of large-scale annotated clinical text datasets, most …
learning is dependent on the availability of large-scale annotated clinical text datasets, most …