Biogenesis, functions, interactions, and resources of non-coding RNAs in plants

H Chao, Y Hu, L Zhao, S Xin, Q Ni, P Zhang… - International Journal of …, 2022 - mdpi.com
Plant transcriptomes encompass a large number of functional non-coding RNAs (ncRNAs),
only some of which have protein-coding capacity. Since their initial discovery, ncRNAs have …

Biogenesis, conservation, and function of miRNA in liverworts

H Pietrykowska, I Sierocka, A Zielezinski… - Journal of …, 2022 - academic.oup.com
MicroRNAs (miRNAs) are small non-coding endogenous RNA molecules, 18–24
nucleotides long, that control multiple gene regulatory pathways via post-transcriptional …

Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses

M Barciszewska-Pacak, K Milanowska… - Frontiers in plant …, 2015 - frontiersin.org
Arabidopsis microRNA expression regulation was studied in a wide array of abiotic stresses
such as drought, heat, salinity, copper excess/deficiency, cadmium excess, and sulfur …

mRNA adenosine methylase (MTA) deposits m6A on pri-miRNAs to modulate miRNA biogenesis in Arabidopsis thaliana

SS Bhat, D Bielewicz, T Gulanicz… - Proceedings of the …, 2020 - National Acad Sciences
In Arabidopsis thaliana, the METTL3 homolog, mRNA adenosine methylase (MTA)
introduces N 6-methyladenosine (m6A) into various coding and noncoding RNAs of the …

Transcriptionally and post-transcriptionally regulated microRNAs in heat stress response in barley

K Kruszka, A Pacak, A Swida-Barteczka… - Journal of …, 2014 - academic.oup.com
Heat stress is one of the major abiotic factors that can induce severe plant damage, leading
to a decrease in crop plant productivity. Despite barley being a cereal of great economic …

Salt stress reveals a new role for ARGONAUTE1 in miRNA biogenesis at the transcriptional and posttranscriptional levels

J Dolata, M Bajczyk, D Bielewicz, K Niedojadlo… - Plant …, 2016 - academic.oup.com
Plants as sessile organisms have developed prompt response mechanisms to react to rapid
environmental changes. In addition to the transcriptional regulation of gene expression …

Chromatin-associated microprocessor assembly is regulated by the U1 snRNP auxiliary protein PRP40

A Stepien, J Dolata, T Gulanicz, D Bielewicz… - The Plant …, 2022 - academic.oup.com
In plants, microRNA (miRNA) biogenesis involves cotranscriptional processing of RNA
polymerase II (RNAPII)-generated primary transcripts by a multi-protein complex termed the …

Cold-dependent expression and alternative splicing of Arabidopsis long non-coding RNAs

CPG Calixto, NA Tzioutziou, AB James… - Frontiers in Plant …, 2019 - frontiersin.org
Plants re-program their gene expression when responding to changing environmental
conditions. Besides differential gene expression, extensive alternative splicing (AS) of pre …

MicroRNA172b-5p/trehalose-6-phosphate synthase module stimulates trehalose synthesis and microRNA172b-3p/AP2-like module accelerates flowering in barley …

A Swida-Barteczka, A Pacak, K Kruszka… - Frontiers in Plant …, 2023 - frontiersin.org
MicroRNAs (miRNAs) are major regulators of gene expression during plant development
under normal and stress conditions. In this study, we analyzed the expression of 150 …

MicroRNAs are intensively regulated during induction of somatic embryogenesis in Arabidopsis

K Szyrajew, D Bielewicz, J Dolata, AM Wójcik… - Frontiers in Plant …, 2017 - frontiersin.org
Several genes encoding transcription factors (TFs) were indicated to have a key role in the
induction of somatic embryogenesis (SE), which is triggered in the somatic cells of plants. In …