Walsh code based numerical mapping method for the identification of protein coding regions in eukaryotes

NK Vaegae - Biomedical Signal Processing and Control, 2020 - Elsevier
The protein coding regions play a significant role for gene applications in genomic signal
processing. Unlike prokaryotes, the coding regions in eukaryotes are arranged in a random …

Gene prediction by the noise-assisted MEMD and wavelet transform for identifying the protein coding regions

Q Zheng, T Chen, W Zhou, L Xie, H Su - Biocybernetics and Biomedical …, 2021 - Elsevier
The analysis of protein coding regions of DNA sequences is one of the most fundamental
applications in bioinformatics. A number of model-independent approaches have been …

Identification of exon locations in DNA sequences using a fractional digital anti-notch filter

M Lehilahy, Y Ferdi - Biomedical Signal Processing and Control, 2023 - Elsevier
Identification of protein coding region (exon) locations in DNA sequences is a fundamental
initial step in genomic signal processing (GSP). Several techniques have already been …

EpiMiner: A three-stage co-information based method for detecting and visualizing epistatic interactions

J Shang, J Zhang, Y Sun, Y Zhang - Digital Signal Processing, 2014 - Elsevier
Detecting and visualizing nonlinear interactive effects of Single Nucleotide Polymorphisms
(SNPs) or epistatic interactions are important topics of signal processing having great …

Study of effectiveness of FIR and IIR filters in Exon identification: A comparative approach

S Kar, M Ganguly - Materials Today: Proceedings, 2022 - Elsevier
In recent years, DSP has been widely used in the area of DNA sequence analysis, detection
of protein coding and non-coding regions and also in finding abnormalities present in …

A new numerical approach for DNA representation using modified Gabor wavelet transform for the identification of protein coding regions

MR Kumar, NK Vaegae - Biocybernetics and Biomedical Engineering, 2020 - Elsevier
The fundamental step in genomic signal processing applications is to assign mathematical
descriptor to nucleotides {A, T, G, C} of DNA molecule for discrete representation. The …

A pattern recognition model to distinguish cancerous DNA sequences via signal processing methods

A Khodaei, MR Feizi-Derakhshi… - Soft Computing, 2020 - Springer
Cancer is one of the life-threatening diseases caused by changes in the structure of genetic
components of the cell. DNA sequences are one of the most important factors in the …

VLSI implementation of anti‐notch lattice structure for identification of exon regions in Eukaryotic genes

V Pathak, SJ Nanda, AM Joshi… - IET Computers & Digital …, 2020 - Wiley Online Library
In a Eukaryotic gene, identification of exon regions is crucial for protein formation. The
periodic‐3 property of exon regions has been used for its identification. An anti‐notch infinite …

Improved filtering approach for identification of protein-coding regions in eukaryotes by background noise reduction using S–G filter

AK Singh, VK Srivastava - … Modeling Analysis in Health Informatics and …, 2021 - Springer
Unlike prokaryotic genomes, the arrangement of protein-coding regions in eukaryotic
genomes is not continuous. It is interrupted by the non-coding DNA sequences called …

SAVMD: An adaptive signal processing method for identifying protein coding regions

Q Zheng, T Chen, W Zhou, SA Marhon, L Xie… - … Signal Processing and …, 2021 - Elsevier
The identification of protein coding regions is a major topic of research in the field of gene
prediction. A number of digital signal processing (DSP) based approaches, which exploit 3 …