Transcriptome-Powered Pluripotent Stem Cell Differentiation for Regenerative Medicine

DA Ogi, S Jin - Cells, 2023 - mdpi.com
Pluripotent stem cells are endless sources for in vitro engineering human tissues for
regenerative medicine. Extensive studies have demonstrated that transcription factors are …

RNA Sequencing in Disease Diagnosis

C Smail, SB Montgomery - Annual Review of Genomics and …, 2024 - annualreviews.org
RNA sequencing (RNA-seq) enables the accurate measurement of multiple transcriptomic
phenotypes for modeling the impacts of disease variants. Advances in technologies …

Basal activity of PINK1 and PRKN in cell models and rodent brain

JO Watzlawik, FC Fiesel, G Fiorino, BA Bustillos… - Autophagy, 2024 - Taylor & Francis
The ubiquitin kinase-ligase pair PINK1-PRKN recognizes and transiently labels damaged
mitochondria with ubiquitin phosphorylated at Ser65 (p-S65-Ub) to mediate their selective …

Multi-omics integration of scRNA-seq time series data predicts new intervention points for Parkinson's disease

K Mihajlović, G Ceddia, N Malod-Dognin, G Novak… - Scientific Reports, 2024 - nature.com
Parkinson's disease (PD) is a complex neurodegenerative disorder without a cure. The
onset of PD symptoms corresponds to 50% loss of midbrain dopaminergic (mDA) neurons …

Region-specific changes in gene expression are associated with cognitive deficits in the alpha-synuclein-induced model of Parkinson's disease: A transcriptomic …

MF Manchinu, M Pala, MF Palmas, MA Diana… - Experimental …, 2024 - Elsevier
Mild cognitive impairment (MCI) is a common trait of Parkinson's disease (PD), often
associated with early motor deficits, eventually evolving to PD with dementia in later disease …

Proteome dynamics in iPSC-derived human dopaminergic neurons

C Cavarischia-Rega, K Sharma… - Molecular & Cellular …, 2024 - mcponline.org
Dopaminergic neurons participate in fundamental physiological processes and are the cell
type primarily affected in Parkinson's disease. Their analysis is challenging due to the …

Single-Cell Sequencing Insights into the Transcriptional Landscape of Parkinson's Disease

Y Su, H Zheng, X Cui, S Zhang, S Zhang, Z Hu… - Ageing Research …, 2024 - Elsevier
Parkinson's disease (PD) is the second most prevalent neurodegenerative disorder, with an
unknown etiology and no specific treatment. Emerging single-cell and single-nucleus RNA …

Data mining of microarray datasets in translational neuroscience

LM O'Connor, BA O'Connor, J Zeng, CH Lo - Brain Sciences, 2023 - mdpi.com
Data mining involves the computational analysis of a plethora of publicly available datasets
to generate new hypotheses that can be further validated by experiments for the improved …

A deep learning model for prediction of autism status using whole-exome sequencing data

Q Wu, EM Morrow, ED Gamsiz Uzun - PLOS Computational …, 2024 - journals.plos.org
Autism is a developmental disability. Research demonstrated that children with autism
benefit from early diagnosis and early intervention. Genetic factors are considered major …

Induced-pluripotent stem cells and neuroproteomics as tools for studying neurodegeneration

C Brandão-Teles, GS Zuccoli… - Biochemical Society …, 2024 - portlandpress.com
The investigation of neurodegenerative diseases advanced significantly with the advent of
cell-reprogramming technology, leading to the creation of new models of human illness …