Small RNAs and their roles in plant development

X Chen - Annual Review of Cell and Developmental, 2009 - annualreviews.org
Small RNAs of 20–30 nucleotides guide regulatory processes at the DNA or RNA level in a
wide range of eukaryotic organisms. Many, although not all, small RNAs are processed from …

Epigenetic regulation of transposable elements in plants

D Lisch - Annual review of plant biology, 2009 - annualreviews.org
Transposable elements make up a substantial proportion of most plant genomes. Because
they are potentially highly mutagenic, transposons are controlled by a set of mechanisms …

Posttranscriptional Induction of Two Cu/Zn Superoxide Dismutase Genes in Arabidopsis Is Mediated by Downregulation of miR398 and Important for Oxidative Stress …

R Sunkar, A Kapoor, JK Zhu - The Plant Cell, 2006 - academic.oup.com
MicroRNAs (miRNAs) are a class of regulatory RNAs of∼ 21 nucleotides that
posttranscriptionally regulate gene expression by directing mRNA cleavage or translational …

[HTML][HTML] ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase

Z Gong, T Morales-Ruiz, RR Ariza, T Roldán-Arjona… - Cell, 2002 - cell.com
Mutations in the Arabidopsis ROS1 locus cause transcriptional silencing of a transgene and
a homologous endogenous gene. In the ros1 mutants, the promoter of the silenced loci is …

RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genome

Q Li, JI Gent, G Zynda, J Song… - Proceedings of the …, 2015 - National Acad Sciences
The maize genome is relatively large (∼ 2.3 Gb) and has a complex organization of
interspersed genes and transposable elements, which necessitates frequent boundaries …

Functional Evolution in the Plant SQUAMOSA-PROMOTER BINDING PROTEIN-LIKE (SPL) Gene Family

JC Preston, LC Hileman - Frontiers in plant science, 2013 - frontiersin.org
The SQUAMOSA-PROMOTER BINDING PROTEIN-LIKE (SPL) family of transcription factors
is functionally diverse, controlling a number of fundamental aspects of plant growth and …

DNA methylation and epigenetic inheritance in plants and filamentous fungi

RA Martienssen, V Colot - Science, 2001 - science.org
Plants and filamentous fungi share with mammals enzymes responsible for DNA
methylation. In these organisms, DNA methylation is associated with gene silencing and …

DNA methylation and epigenetics

J Bender - Annu. Rev. Plant Biol., 2004 - annualreviews.org
▪ Abstract In many eukaryotes, including plants, DNA methylation provides a heritable mark
that guides formation of transcriptionally silent heterochromatin. In plants, aberrant RNA …

Clusters and superclusters of phased small RNAs in the developing inflorescence of rice

C Johnson, A Kasprzewska, K Tennessen… - Genome …, 2009 - genome.cshlp.org
To address the role of small regulatory RNAs in rice development, we generated a large
data set of small RNAs from mature leaves and developing roots, shoots, and …

Transgenerational epigenetic inheritance: more questions than answers

L Daxinger, E Whitelaw - Genome research, 2010 - genome.cshlp.org
Epigenetic modifications are widely accepted as playing a critical role in the regulation of
gene expression and thereby contributing to the determination of the phenotype of …