Microbial diversity in extreme environments
WS Shu, LN Huang - Nature Reviews Microbiology, 2022 - nature.com
A wide array of microorganisms, including many novel, phylogenetically deeply rooted taxa,
survive and thrive in extreme environments. These unique and reduced-complexity …
survive and thrive in extreme environments. These unique and reduced-complexity …
Diversity, ecology and evolution of Archaea
Compared to bacteria, our knowledge of archaeal biology is limited. Historically,
microbiologists have mostly relied on culturing and single-gene diversity surveys to …
microbiologists have mostly relied on culturing and single-gene diversity surveys to …
A standardized archaeal taxonomy for the Genome Taxonomy Database
The accrual of genomic data from both cultured and uncultured microorganisms provides
new opportunities to develop systematic taxonomies based on evolutionary relationships …
new opportunities to develop systematic taxonomies based on evolutionary relationships …
Major new microbial groups expand diversity and alter our understanding of the tree of life
CJ Castelle, JF Banfield - Cell, 2018 - cell.com
The recent recovery of genomes for organisms from phyla with no isolated representative
(candidate phyla) via cultivation-independent genomics enabled delineation of major new …
(candidate phyla) via cultivation-independent genomics enabled delineation of major new …
Archaea and the origin of eukaryotes
Woese and Fox's 1977 paper on the discovery of the Archaea triggered a revolution in the
field of evolutionary biology by showing that life was divided into not only prokaryotes and …
field of evolutionary biology by showing that life was divided into not only prokaryotes and …
Biosynthetic capacity, metabolic variety and unusual biology in the CPR and DPANN radiations
Candidate phyla radiation (CPR) bacteria and DPANN (an acronym of the names of the first
included phyla) archaea are massive radiations of organisms that are widely distributed …
included phyla) archaea are massive radiations of organisms that are widely distributed …
Genome-resolved metagenomics reveals site-specific diversity of episymbiotic CPR bacteria and DPANN archaea in groundwater ecosystems
Candidate phyla radiation (CPR) bacteria and DPANN archaea are unisolated, small-celled
symbionts that are often detected in groundwater. The effects of groundwater geochemistry …
symbionts that are often detected in groundwater. The effects of groundwater geochemistry …
New CRISPR–Cas systems from uncultivated microbes
D Burstein, LB Harrington, SC Strutt, AJ Probst… - Nature, 2017 - nature.com
CRISPR–Cas systems provide microbes with adaptive immunity by employing short DNA
sequences, termed spacers, that guide Cas proteins to cleave foreign DNA,. Class 2 …
sequences, termed spacers, that guide Cas proteins to cleave foreign DNA,. Class 2 …
The growing tree of Archaea: new perspectives on their diversity, evolution and ecology
The Archaea occupy a key position in the Tree of Life, and are a major fraction of microbial
diversity. Abundant in soils, ocean sediments and the water column, they have crucial roles …
diversity. Abundant in soils, ocean sediments and the water column, they have crucial roles …
Insights into the phylogeny and coding potential of microbial dark matter
Genome sequencing enhances our understanding of the biological world by providing
blueprints for the evolutionary and functional diversity that shapes the biosphere. However …
blueprints for the evolutionary and functional diversity that shapes the biosphere. However …