Almost forgotten or latest practice? AFLP applications, analyses and advances

HM Meudt, AC Clarke - Trends in plant science, 2007 - cell.com
Amplified fragment length polymorphism (AFLP) DNA fingerprinting is a firmly established
molecular marker technique, with broad applications in population genetics, shallow …

The effect of hybridization on secondary metabolites and herbivore resistance: implications for the evolution of chemical diversity in plants

D Cheng, K Vrieling, PGL Klinkhamer - Phytochemistry Reviews, 2011 - Springer
The diversity of secondary metabolites (SMs) has been poorly understood from both a
mechanistic and a functional perspective. Hybridization is suggested to contribute to the …

An ITS phylogeny of tribe Senecioneae (Asteraceae) and a new delimitation of Senecio L.

PB Pelser, B Nordenstam, JW Kadereit, LE Watson - Taxon, 2007 - Wiley Online Library
Senecioneae is the largest tribe of Asteraceae, comprised of ca. 150 genera and 3,000
species. Approximately one‐third of its species are placed in Senecio, making it one of the …

Patterns and causes of incongruence between plastid and nuclear Senecioneae (Asteraceae) phylogenies

PB Pelser, AH Kennedy, EJ Tepe… - American journal of …, 2010 - Wiley Online Library
One of the longstanding questions in phylogenetic systematics is how to address
incongruence among phylogenies obtained from multiple markers and how to determine the …

Radiation and diversification within the Ligularia–Cremanthodium–Parasenecio complex (Asteraceae) triggered by uplift of the Qinghai-Tibetan Plateau

JQ Liu, YJ Wang, AL Wang, O Hideaki… - Molecular Phylogenetics …, 2006 - Elsevier
The Ligularia–Cremanthodium–Parasenecio (L–C–P) complex of the Tussilagininae
(Asteraceae: Senecioneae) contains more than 200 species that are endemic to the Qinghai …

Arbitrarily amplified DNA markers as characters for phylogenetic inference

JD Bussell, M Waycott, JA Chappill - Perspectives in Plant Ecology …, 2005 - Elsevier
The ease with which arbitrarily amplified dominant (AAD) markers such as RAPD, AFLP and
ISSR could be used to generate vast quantities of data led to their rapid application …

Phylogenetic signal in AFLP data sets

WJM Koopman - Systematic Biology, 2005 - academic.oup.com
AFLP markers provide a potential source of phylogenetic information for molecular
systematic studies. However, there are properties of restriction fragment data that limit …

Complex distribution patterns of di‐, tetra‐, and hexaploid cytotypes in the European high mountain plant Senecio carniolicus (Asteraceae)

J Suda, H Weiss‐Schneeweiss… - American Journal of …, 2007 - Wiley Online Library
DNA ploidy levels were estimated using DAPI‐flow cytometry of silica‐dried specimens of
the European mountain plant Senecio carniolicus (Asteraceae), covering its entire …

Optimizing automated AFLP scoring parameters to improve phylogenetic resolution

BR Holland, AC Clarke, HM Meudt - Systematic Biology, 2008 - academic.oup.com
The amplified fragment length polymorphism (AFLP) technique is an increasingly popular
component of the phylogenetic toolbox, particularly for plant species. Technological …

Development of COS genes as universally amplifiable markers for phylogenetic reconstructions of closely related plant species

M Li, J Wunder, G Bissoli, E Scarponi, S Gazzani… - …, 2008 - Wiley Online Library
With the aim of developing widely applicable gene markers for phylogenetic reconstructions
at low taxonomic level, we tested the low copy nuclear Conserved Ortholog Set (COS) …