Water dynamics in the hydration shells of biomolecules

D Laage, T Elsaesser, JT Hynes - Chemical Reviews, 2017 - ACS Publications
The structure and function of biomolecules are strongly influenced by their hydration shells.
Structural fluctuations and molecular excitations of hydrating water molecules cover a broad …

Quantum ergodicity and energy flow in molecules

DM Leitner - Advances in Physics, 2015 - Taylor & Francis
We review a theory for coupled many-nonlinear oscillator systems that describes quantum
ergodicity and energy flow in molecules. The theory exploits the isomorphism between …

Relaxation-assisted two-dimensional infrared (RA 2DIR) method: Accessing distances over 10 Å and measuring bond connectivity patterns

IV Rubtsov - Accounts of chemical research, 2009 - ACS Publications
Development of new approaches for measuring three-dimensional structures and dynamics
of structural changes is important for a number of natural sciences, including structural …

[图书][B] Proteins: energy, heat and signal flow

DM Leitner, JE Straub - 2009 - taylorfrancis.com
Computational modeling can provide a wealth of insight into how energy flow in proteins
mediates protein function. Computational methods can also address fundamental questions …

Ballistic and diffusive vibrational energy transport in molecules

IV Rubtsov, AL Burin - The Journal of chemical physics, 2019 - pubs.aip.org
Energy transport in molecules is essential for many areas of science and technology. Strong
covalent bonds of a molecular backbone can facilitate the involvement of the molecule's …

Thermal boundary conductance and thermal rectification in molecules

DM Leitner - The Journal of Physical Chemistry B, 2013 - ACS Publications
An approach is presented to calculate thermal boundary resistance in molecules, which
occurs, for example, at the interfaces between moieties held at fixed temperatures and a …

Energy transport across interfaces in biomolecular systems

DM Leitner, HD Pandey, KM Reid - The Journal of Physical …, 2019 - ACS Publications
Energy transport during chemical reactions or following photoexcitation in systems of
biological molecules is mediated by numerous interfaces that separate chemical groups and …

Time-resolved spectroscopic mapping of vibrational energy flow in proteins: Understanding thermal diffusion at the nanoscale

Y Mizutani, M Mizuno - The Journal of Chemical Physics, 2022 - pubs.aip.org
Vibrational energy exchange between various degrees of freedom is critical to barrier-
crossing processes in proteins. Hemeproteins are well suited for studying vibrational energy …

Anisotropic energy flow and allosteric ligand binding in albumin

G Li, D Magana, RB Dyer - Nature communications, 2014 - nature.com
Allosteric interactions in proteins generally involve propagation of local structural changes
through the protein to a remote site. Anisotropic energy transport is thought to couple the …

Thermal Energy Transport through Nonbonded Native Contacts in Protein

T Wang, T Yamato, W Sugiura - The Journal of Physical Chemistry …, 2024 - ACS Publications
Within the protein interior, where we observe various types of interactions, nonuniform flow
of thermal energy occurs along the polypeptide chain and through nonbonded native …