Turning junk into gold: domestication of transposable elements and the creation of new genes in eukaryotes

JN Volff - Bioessays, 2006 - Wiley Online Library
Autonomous transposable elements, generally considered as junk and selfish, encode
transposition proteins that can bind, copy, break, join or degrade nucleic acids as well as …

The modern view of B chromosomes under the impact of high scale omics analyses

SF Ahmad, C Martins - Cells, 2019 - mdpi.com
Supernumerary B chromosomes (Bs) are extra karyotype units in addition to A
chromosomes, and are found in some fungi and thousands of animals and plant species. Bs …

Transposable elements domesticated and neofunctionalized by eukaryotic genomes

AM Alzohairy, G Gyulai, RK Jansen, A Bahieldin - Plasmid, 2013 - Elsevier
Whole genome sequencing has provided a massive amount of information about the origin,
diversity and genomic impact of repetitive DNA sequences (repDNA). Among the many …

Taming, Domestication and Exaptation: Trajectories of Transposable Elements in Genomes

P Capy - Cells, 2021 - mdpi.com
During evolution, several types of sequences pass through genomes. Along with mutations
and internal genetic tinkering, they are a useful source of genetic variability for adaptation …

Landscape and evolutionary dynamics of terminal repeat retrotransposons in miniature in plant genomes

D Gao, Y Li, KD Kim, B Abernathy, SA Jackson - Genome biology, 2016 - Springer
Background Terminal repeat retrotransposons in miniature (TRIMs) are a unique group of
small long terminal repeat retrotransposons that are difficult to identify. Thus far, only a few …

Proliferation of Ty3/gypsy-like retrotransposons in hybrid sunflower taxa inferred from phylogenetic data

MC Ungerer, SC Strakosh, KM Stimpson - Bmc Biology, 2009 - Springer
Background Long terminal repeat (LTR) retrotransposons are a class of mobile genetic
element capable of autonomous transposition via an RNA intermediate. Their large size and …

Different scales of Ty1/copia-like retrotransposon proliferation in the genomes of three diploid hybrid sunflower species

T Kawakami, SC Strakosh, Y Zhen, MC Ungerer - Heredity, 2010 - nature.com
Activation of transposable elements in species' genomes represents an important
mechanism of new mutation and of potential rapid change in genome size. Thus, it is …

Novel sex pheromone desaturases in the genomes of corn borers generated through gene duplication and retroposon fusion

B Xue, AP Rooney, M Kajikawa… - Proceedings of the …, 2007 - National Acad Sciences
The biosynthesis of female moth sex pheromone blends is controlled by a number of
different enzymes, many of which are encoded by members of multigene families. One such …

Exon creation and establishment in human genes

A Corvelo, E Eyras - Genome biology, 2008 - Springer
Background A large proportion of species-specific exons are alternatively spliced. In
primates, Alu elements play a crucial role in the process of exon creation but many new …

Modern genomes with retro-look: retrotransposed elements, retroposition and the origin of new genes

JN Volff, J Brosius - Gene and Protein Evolution, 2007 - karger.com
A fascinating evolutionary facet of retroposition is its ability to generate a dynamic reservoir
of sequences for the formation of new genes within genomes. Retroelement genes, such as …