Introducing memory in coarse-grained molecular simulations

V Klippenstein, M Tripathy, G Jung… - The Journal of …, 2021 - ACS Publications
Preserving the correct dynamics at the coarse-grained (CG) level is a pressing problem in
the development of systematic CG models in soft matter simulation. Starting from the seminal …

Optical trapping and binding

RW Bowman, MJ Padgett - Reports on Progress in Physics, 2013 - iopscience.iop.org
The phenomenon of light's momentum was first observed in the laboratory at the beginning
of the twentieth century, and its potential for manipulating microscopic particles was …

Programmable viscoelasticity in protein-RNA condensates with disordered sticker-spacer polypeptides

I Alshareedah, MM Moosa, M Pham… - Nature …, 2021 - nature.com
Liquid-liquid phase separation of multivalent proteins and RNAs drives the formation of
biomolecular condensates that facilitate membrane-free compartmentalization of subcellular …

Advances in the microrheology of complex fluids

TA Waigh - Reports on Progress in Physics, 2016 - iopscience.iop.org
New developments in the microrheology of complex fluids are considered. Firstly the
requirements for a simple modern particle tracking microrheology experiment are …

Construction of multiphasic membraneless organelles towards spontaneous spatial segregation and directional flow of biochemical reactions

F Zhorabek, MS Abesekara, J Liu, X Dai, J Huang… - Chemical …, 2023 - pubs.rsc.org
Many intracellular membraneless organelles (MLOs) appear to adapt a hierarchical
multicompartment organization for efficient coordination of highly complex reaction …

Holographic optical tweezers and their relevance to lab on chip devices

M Padgett, R Di Leonardo - Lab on a Chip, 2011 - pubs.rsc.org
During the last decade, optical tweezers have been transformed by the combined availability
of spatial light modulators and the speed of low-cost computing to drive them. Holographic …

Fundamental Aspects of Phase-Separated Biomolecular Condensates

HX Zhou, D Kota, S Qin, R Prasad - Chemical Reviews, 2024 - ACS Publications
Biomolecular condensates, formed through phase separation, are upending our
understanding in much of molecular, cell, and developmental biology. There is an urgent …

Scaling perspective on dynamics of nanoparticles in polymers: length-and time-scale dependent nanoparticle–polymer coupling

T Ge - Macromolecules, 2023 - ACS Publications
The motion of nanoparticles in a polymer matrix is dictated by the intricate coupling of the
nanoparticles and surrounding polymers. Various length-and time-scale dependent features …

Microrheology with optical tweezers: data analysis

M Tassieri, RML Evans, RL Warren… - New Journal of …, 2012 - iopscience.iop.org
We present a data analysis procedure that provides the solution to a long-standing issue in
microrheology studies, ie the evaluation of the fluids' linear viscoelastic properties from the …

When microrheology, bulk rheology, and microfluidics meet: Broadband rheology of hydroxyethyl cellulose water solutions

F Del Giudice, M Tassieri, C Oelschlaeger… - …, 2017 - ACS Publications
In this work, we present new insights related to a debate on the morphological structure of
hydroxyethyl cellulose (HEC) molecules when dissolved in water, ie, whether HEC adopts a …