Heart-rate variability—more than heart beats?

G Ernst - Frontiers in public health, 2017 - frontiersin.org
Heart-rate variability (HRV) is frequently introduced as mirroring imbalances within the
autonomous nerve system. Many investigations are based on the paradigm that increased …

Biomaterialomics: Data science-driven pathways to develop fourth-generation biomaterials

B Basu, NH Gowtham, Y Xiao, SR Kalidindi, KW Leong - Acta Biomaterialia, 2022 - Elsevier
Conventional approaches to developing biomaterials and implants require intuitive tailoring
of manufacturing protocols and biocompatibility assessment. This leads to longer …

Mapping gene regulatory networks from single-cell omics data

MWEJ Fiers, L Minnoye, S Aibar… - Briefings in …, 2018 - academic.oup.com
Single-cell techniques are advancing rapidly and are yielding unprecedented insight into
cellular heterogeneity. Mapping the gene regulatory networks (GRNs) underlying cell states …

Gene regulatory network inference resources: A practical overview

D Mercatelli, L Scalambra, L Triboli, F Ray… - Biochimica et Biophysica …, 2020 - Elsevier
Transcriptional regulation is a fundamental molecular mechanism involved in almost every
aspect of life, from homeostasis to development, from metabolism to behavior, from reaction …

Single-cell network biology for resolving cellular heterogeneity in human diseases

J Cha, I Lee - Experimental & molecular medicine, 2020 - nature.com
Understanding cellular heterogeneity is the holy grail of biology and medicine. Cells
harboring identical genomes show a wide variety of behaviors in multicellular organisms …

Computational methods for gene regulatory networks reconstruction and analysis: a review

FM Delgado, F Gómez-Vela - Artificial intelligence in medicine, 2019 - Elsevier
In the recent years, the vast amount of genetic information generated by new-generation
approaches, have led to the need of new data handling methods. The integrative analysis of …

A comprehensive overview and critical evaluation of gene regulatory network inference technologies

M Zhao, W He, J Tang, Q Zou… - Briefings in bioinformatics, 2021 - academic.oup.com
Gene regulatory network (GRN) is the important mechanism of maintaining life process,
controlling biochemical reaction and regulating compound level, which plays an important …

Leveraging chromatin accessibility for transcriptional regulatory network inference in T Helper 17 Cells

ER Miraldi, M Pokrovskii, A Watters, DM Castro… - Genome …, 2019 - genome.cshlp.org
Transcriptional regulatory networks (TRNs) provide insight into cellular behavior by
describing interactions between transcription factors (TFs) and their gene targets. The assay …

Stem cell bioengineering: building from stem cell biology

M Tewary, N Shakiba, PW Zandstra - Nature Reviews Genetics, 2018 - nature.com
New fundamental discoveries in stem cell biology have yielded potentially transformative
regenerative therapeutics. However, widespread implementation of stem-cell-derived …

Optimal inference of hidden Markov models through expert-acquired data

A Ravari, SF Ghoreishi, M Imani - IEEE Transactions on …, 2024 - ieeexplore.ieee.org
This paper focuses on inferring a general class of hidden Markov models (HMMs) using data
acquired from experts. Expert-acquired data contain decisions/actions made by …