Drugging Ras GTPase: a comprehensive mechanistic and signaling structural view

S Lu, H Jang, S Gu, J Zhang, R Nussinov - Chemical Society Reviews, 2016 - pubs.rsc.org
Ras proteins are small GTPases, cycling between inactive GDP-bound and active GTP-
bound states. Through these switches they regulate signaling that controls cell growth and …

EGFR-mediated autophagy in tumourigenesis and therapeutic resistance

M Wu, P Zhang - Cancer letters, 2020 - Elsevier
The epidermal growth factor receptor (EGFR) is a receptor tyrosine kinase (RTK) that links
extracellular signals to the control of cell survival, growth, proliferation and differentiation …

A structural model of a Ras–Raf signalosome

VP Mysore, ZW Zhou, C Ambrogio, L Li… - Nature structural & …, 2021 - nature.com
The protein K-Ras functions as a molecular switch in signaling pathways regulating cell
growth. In the human mitogen-activated protein kinase (MAPK) pathway, which is implicated …

Two distinct structures of membrane‐associated homodimers of GTP‐and GDP‐bound KRAS4B revealed by paramagnetic relaxation enhancement

KY Lee, Z Fang, M Enomoto… - Angewandte Chemie …, 2020 - Wiley Online Library
KRAS homo‐dimerization has been implicated in the activation of RAF kinases, however,
the mechanism and structural basis remain elusive. We developed a system to study KRAS …

[HTML][HTML] The quaternary assembly of KRas4B with Raf-1 at the membrane

H Jang, M Zhang, R Nussinov - Computational and Structural …, 2020 - Elsevier
Proximally located in the membrane, oncogenic Ras dimers (or nanoclusters) can recruit
and promote Raf dimerization and MAPK (Raf/MEK/ERK) signaling. Among Ras isoforms …

Membrane-associated Ras dimers are isoform-specific: K-Ras dimers differ from H-Ras dimers

H Jang, S Muratcioglu, A Gursoy, O Keskin… - Biochemical …, 2016 - portlandpress.com
Are the dimer structures of active Ras isoforms similar? This question is significant since Ras
can activate its effectors as a monomer; however, as a dimer, it promotes Raf's activation …

Raf-1 cysteine-rich domain increases the affinity of K-Ras/Raf at the membrane, promoting MAPK signaling

S Li, H Jang, J Zhang, R Nussinov - Structure, 2018 - cell.com
K-Ras4B preferentially activates Raf-1. The high-affinity interaction of Ras-binding domain
(RBD) of Raf with Ras was solved, but the relative position of Raf's cysteine-rich domain …

K-Ras4B remains monomeric on membranes over a wide range of surface densities and lipid compositions

JK Chung, YK Lee, JP Denson, WK Gillette, S Alvarez… - Biophysical journal, 2018 - cell.com
Ras is a membrane-anchored signaling protein that serves as a hub for many signaling
pathways and also plays a prominent role in cancer. The intrinsic behavior of Ras on the …

The small molecule BI-2852 induces a nonfunctional dimer of KRAS

TH Tran, P Alexander, S Dharmaiah… - Proceedings of the …, 2020 - National Acad Sciences
In Kessler et al.(1), the small molecule BI-2852 is shown to bind—at nanomolar affinity—to
KRAS between switch I and II, inhibiting interactions with effectors. Here, we identify an …

High-throughput, single-particle tracking reveals nested membrane domains that dictate KRasG12D diffusion and trafficking

Y Lee, C Phelps, T Huang, B Mostofian, L Wu, Y Zhang… - Elife, 2019 - elifesciences.org
Membrane nanodomains have been implicated in Ras signaling, but what these domains
are and how they interact with Ras remain obscure. Here, using single particle tracking with …