The nucleolus

T Pederson - Cold Spring Harbor perspectives in biology, 2011 - cshperspectives.cshlp.org
When cells are observed by phase contrast microscopy, nucleoli are among the most
conspicuous structures. The nucleolus was formally described between 1835 and 1839, but …

Long noncoding RNA transcriptome of plants

J Liu, H Wang, NH Chua - Plant biotechnology journal, 2015 - Wiley Online Library
Since their discovery more than two decades ago, animal long noncoding RNA s (lnc RNA
s) have emerged as important regulators of many biological processes. Recently, a large …

Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis

M Kalyna, CG Simpson, NH Syed… - Nucleic acids …, 2012 - academic.oup.com
Alternative splicing (AS) coupled to nonsense-mediated decay (NMD) is a post-
transcriptional mechanism for regulating gene expression. We have used a high-resolution …

Nuclear translation visualized by ribosome-bound nascent chain puromycylation

A David, BP Dolan, HD Hickman, JJ Knowlton… - Journal of Cell …, 2012 - rupress.org
Whether protein translation occurs in the nucleus is contentious. To address this question,
we developed the ribopuromycylation method (RPM), which visualizes translation in cells …

Alternative splicing in plants: directing traffic at the crossroads of adaptation and environmental stress

S Filichkin, HD Priest, M Megraw, TC Mockler - Current opinion in plant …, 2015 - Elsevier
Highlights•Alternative splicing results in multiple mRNA isoforms from a single gene.•Cell
type, development, and the environment, modulate splice site selection.•Nonsense …

Nonsense-mediated mRNA decay in human cells: mechanistic insights, functions beyond quality control and the double-life of NMD factors

P Nicholson, H Yepiskoposyan, S Metze… - Cellular and molecular …, 2010 - Springer
Nonsense-mediated decay is well known by the lucid definition of being a RNA surveillance
mechanism that ensures the speedy degradation of mRNAs containing premature …

Nonsense-Mediated Decay of Alternative Precursor mRNA Splicing Variants Is a Major Determinant of the Arabidopsis Steady State Transcriptome

G Drechsel, A Kahles, AK Kesarwani, E Stauffer… - The Plant …, 2013 - academic.oup.com
The nonsense-mediated decay (NMD) surveillance pathway can recognize erroneous
transcripts and physiological mRNAs, such as precursor mRNA alternative splicing (AS) …

[PDF][PDF] The nucleolus

PJ Shaw, EG Jordan - Annual review of cell and developmental …, 1995 - researchgate.net
94 SHAW & JORDAN these processes. The earliest transcriptional events take place near
the junction of the fibrillar centers and the dense fibrillar component; nascent transcripts …

Genome organization in and around the nucleolus

A Németh, G Längst - Trends in genetics, 2011 - cell.com
The nucleolus is the largest compartment of the cell nucleus and is where ribosomal RNAs
(rRNAs) are synthesized, processed and assembled with ribosomal proteins. In addition to …

A chloroplast retrograde signal regulates nuclear alternative splicing

E Petrillo, MA Godoy Herz, A Fuchs, D Reifer, J Fuller… - Science, 2014 - science.org
Light is a source of energy and also a regulator of plant physiological adaptations. We show
here that light/dark conditions affect alternative splicing of a subset of Arabidopsis genes …