[HTML][HTML] Mechanisms of cancer resistance in long-lived mammals

A Seluanov, VN Gladyshev, J Vijg… - Nature Reviews Cancer, 2018 - nature.com
Cancer researchers have traditionally used the mouse and the rat as staple model
organisms. These animals are very short-lived, reproduce rapidly and are highly prone to …

[HTML][HTML] Genetic variation and the de novo assembly of human genomes

MJP Chaisson, RK Wilson, EE Eichler - Nature Reviews Genetics, 2015 - nature.com
The discovery of genetic variation and the assembly of genome sequences are both
inextricably linked to advances in DNA-sequencing technology. Short-read massively …

Distinct longevity mechanisms across and within species and their association with aging

A Tyshkovskiy, S Ma, AV Shindyapina, S Tikhonov… - Cell, 2023 - cell.com
Lifespan varies within and across species, but the general principles of its control remain
unclear. Here, we conducted multi-tissue RNA-seq analyses across 41 mammalian species …

The critically endangered vaquita is not doomed to extinction by inbreeding depression

JA Robinson, CC Kyriazis, SF Nigenda-Morales… - Science, 2022 - science.org
In cases of severe wildlife population decline, a key question is whether recovery efforts will
be impeded by genetic factors, such as inbreeding depression. Decades of excess mortality …

Landscape of adenosine-to-inosine RNA recoding across human tissues

O Gabay, Y Shoshan, E Kopel, U Ben-Zvi… - Nature …, 2022 - nature.com
RNA editing by adenosine deaminases changes the information encoded in the mRNA from
its genomic blueprint. Editing of protein-coding sequences can introduce novel, functionally …

The UCSC genome browser database: 2015 update

KR Rosenbloom, J Armstrong, GP Barber… - Nucleic acids …, 2015 - academic.oup.com
Launched in 2001 to showcase the draft human genome assembly, the UCSC Genome
Browser database (http://genome. ucsc. edu) and associated tools continue to grow …

Enhancer evolution across 20 mammalian species

D Villar, C Berthelot, S Aldridge, TF Rayner, M Lukk… - Cell, 2015 - cell.com
The mammalian radiation has corresponded with rapid changes in noncoding regions of the
genome, but we lack a comprehensive understanding of regulatory evolution in mammals …

Phylogenomic resolution of the cetacean tree of life using target sequence capture

MR McGowen, G Tsagkogeorga… - Systematic …, 2020 - academic.oup.com
The evolution of cetaceans, from their early transition to an aquatic lifestyle to their
subsequent diversification, has been the subject of numerous studies. However, although …

Comparative genomics provides insights into the aquatic adaptations of mammals

Y Yuan, Y Zhang, P Zhang, C Liu… - Proceedings of the …, 2021 - National Acad Sciences
The ancestors of marine mammals once roamed the land and independently committed to
an aquatic lifestyle. These macroevolutionary transitions have intrigued scientists for …

Convergent evolution of the genomes of marine mammals

AD Foote, Y Liu, GWC Thomas, T Vinař, J Alföldi… - Nature …, 2015 - nature.com
Marine mammals from different mammalian orders share several phenotypic traits adapted
to the aquatic environment and therefore represent a classic example of convergent …