The flight of chicken genomics and allied omics-a mini review

N Sukhija, KK Kanaka, RC Goli, P Kapoor… - Ecological Genetics and …, 2023 - Elsevier
Humans mostly obtain animal-based proteins through chicken meat and eggs since there
are no societal taboos. The modern chicken is most effective for producing affordable and …

Remarkable contamination of short-and medium-chain chlorinated paraffins in free-range chicken eggs from rural Tibetan Plateau

W Zhou, K Huang, D Bu, Q Zhang, J Fu… - Environmental …, 2024 - ACS Publications
Rapid social-economic development introduces modern lifestyles into rural areas, not only
bringing numerous modern products but also new pollutants, such as chlorinated paraffins …

Recent advances in the genomic resources for sheep

SA Woolley, M Salavati, EL Clark - Mammalian Genome, 2023 - Springer
Sheep (Ovis aries) provide a vital source of protein and fibre to human populations. In
coming decades, as the pressures associated with rapidly changing climates increase …

Refine localizations of functional variants affecting eggshell color of Lueyang black-boned chicken in the SLCO1B3

Z Wang, Q Chen, Y Wang, Y Wang, R Liu - Poultry Science, 2024 - Elsevier
Table eggs with color-uniformity shell are visually attractive for consumers. Lueyang black-
boned chicken (LBC) lays colorful eggs, which is undesirable for sale of table eggs, but …

[HTML][HTML] Genetic patterns and genome-wide association analysis of eggshell quality traits of egg-type chicken across an extended laying period

X Chen, X Li, C Zhong, X Jiang, G Wu, G Li, Y Yan… - Poultry Science, 2024 - Elsevier
The industry of egg-type chicken has shown a trend of extending the rearing period, with the
goal of breeding chicken breeds capable of producing 500 qualified eggs by 700 d of age …

Dynamic alternations of three-dimensional chromatin architecture contribute to phenotypic characteristics of breast muscle in chicken

Z Wang, W Tian, Y Guo, D Wang, Y Zhang… - Communications …, 2024 - nature.com
Breast muscle growth rate and intramuscular fat (IMF) content show apparent differences
between fast-growing broilers and slow-growing indigenous chickens. However, the …

Livestock species as emerging models for genomic imprinting

JN Hubert, M Perret, J Riquet, J Demars - Frontiers in Cell and …, 2024 - frontiersin.org
Genomic imprinting is an epigenetically-regulated process of central importance in
mammalian development and evolution. It involves multiple levels of regulation, with spatio …

[HTML][HTML] Identification, Design, and Application of Noncoding Cis-Regulatory Elements

L Xu, Y Liu - Biomolecules, 2024 - mdpi.com
Cis-regulatory elements (CREs) play a pivotal role in orchestrating interactions with trans-
regulatory factors such as transcription factors, RNA-binding proteins, and noncoding RNAs …

[HTML][HTML] Comparison of genomic prediction accuracy using different models for egg production traits in Taiwan country chicken

TC Tu, CJ Lin, MC Liu, ZT Hsu, CF Chen - Poultry Science, 2024 - Elsevier
In local chickens targeted for niche markets, genotyping costs are relatively high due to the
small population size and diverse breeding goals. The single-step genomic best linear …

A body map of super-enhancers and their function in pig

Y Yang, X Li, Z Meng, Y Liu, K Qian, M Chu… - Frontiers in Veterinary …, 2023 - frontiersin.org
Introduction Super-enhancers (SEs) are clusters of enhancers that act synergistically to drive
the high-level expression of genes involved in cell identity and function. Although SEs have …