[HTML][HTML] Single-cell RNA sequencing technologies and bioinformatics pipelines
Rapid progress in the development of next-generation sequencing (NGS) technologies in
recent years has provided many valuable insights into complex biological systems, ranging …
recent years has provided many valuable insights into complex biological systems, ranging …
[HTML][HTML] A survey of Bayesian Network structure learning
Abstract Bayesian Networks (BNs) have become increasingly popular over the last few
decades as a tool for reasoning under uncertainty in fields as diverse as medicine, biology …
decades as a tool for reasoning under uncertainty in fields as diverse as medicine, biology …
DAG-GNN: DAG structure learning with graph neural networks
Learning a faithful directed acyclic graph (DAG) from samples of a joint distribution is a
challenging combinatorial problem, owing to the intractable search space superexponential …
challenging combinatorial problem, owing to the intractable search space superexponential …
Dags with no tears: Continuous optimization for structure learning
Estimating the structure of directed acyclic graphs (DAGs, also known as Bayesian
networks) is a challenging problem since the search space of DAGs is combinatorial and …
networks) is a challenging problem since the search space of DAGs is combinatorial and …
Dagma: Learning dags via m-matrices and a log-determinant acyclicity characterization
The combinatorial problem of learning directed acyclic graphs (DAGs) from data was
recently framed as a purely continuous optimization problem by leveraging a differentiable …
recently framed as a purely continuous optimization problem by leveraging a differentiable …
Causal discovery with reinforcement learning
S Zhu, I Ng, Z Chen - arXiv preprint arXiv:1906.04477, 2019 - arxiv.org
Discovering causal structure among a set of variables is a fundamental problem in many
empirical sciences. Traditional score-based casual discovery methods rely on various local …
empirical sciences. Traditional score-based casual discovery methods rely on various local …
Beware of the simulated dag! causal discovery benchmarks may be easy to game
Simulated DAG models may exhibit properties that, perhaps inadvertently, render their
structure identifiable and unexpectedly affect structure learning algorithms. Here, we show …
structure identifiable and unexpectedly affect structure learning algorithms. Here, we show …
A survey on Bayesian network structure learning from data
A necessary step in the development of artificial intelligence is to enable a machine to
represent how the world works, building an internal structure from data. This structure should …
represent how the world works, building an internal structure from data. This structure should …
[HTML][HTML] A million variables and more: the fast greedy equivalence search algorithm for learning high-dimensional graphical causal models, with an application to …
We describe two modifications that parallelize and reorganize caching in the well-known
Greedy Equivalence Search algorithm for discovering directed acyclic graphs on random …
Greedy Equivalence Search algorithm for discovering directed acyclic graphs on random …
Privbayes: Private data release via bayesian networks
Privacy-preserving data publishing is an important problem that has been the focus of
extensive study. The state-of-the-art solution for this problem is differential privacy, which …
extensive study. The state-of-the-art solution for this problem is differential privacy, which …