Plant small RNAs: their biogenesis, regulatory roles, and functions

J Zhan, BC Meyers - Annual Review of Plant Biology, 2023 - annualreviews.org
Plant cells accumulate small RNA molecules that regulate plant development, genome
stability, and environmental responses. These small RNAs fall into three major classes …

Dynamics and function of DNA methylation in plants

H Zhang, Z Lang, JK Zhu - Nature reviews Molecular cell biology, 2018 - nature.com
DNA methylation is a conserved epigenetic modification that is important for gene regulation
and genome stability. Aberrant patterns of DNA methylation can lead to plant developmental …

Epigenetic regulation of antagonistic receptors confers rice blast resistance with yield balance

Y Deng, K Zhai, Z Xie, D Yang, X Zhu, J Liu, X Wang… - Science, 2017 - science.org
Crop breeding aims to balance disease resistance with yield; however, single resistance (R)
genes can lead to resistance breakdown, and R gene pyramiding may affect growth fitness …

Revisiting criteria for plant microRNA annotation in the era of big data

MJ Axtell, BC Meyers - The Plant Cell, 2018 - academic.oup.com
Abstract MicroRNAs (miRNAs) are∼ 21-nucleotide-long regulatory RNAs that arise from
endonucleolytic processing of hairpin precursors. Many function as essential …

Dynamics of DNA methylation and its functions in plant growth and development

S Kumar, T Mohapatra - Frontiers in Plant Science, 2021 - frontiersin.org
Epigenetic modifications in DNA bases and histone proteins play important roles in the
regulation of gene expression and genome stability. Chemical modification of DNA base …

A transposable element in a NAC gene is associated with drought tolerance in maize seedlings

H Mao, H Wang, S Liu, Z Li, X Yang, J Yan, J Li… - Nature …, 2015 - nature.com
Drought represents a major constraint on maize production worldwide. Understanding the
genetic basis for natural variation in drought tolerance of maize may facilitate efforts to …

Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements

D Secco, C Wang, H Shou, MD Schultz, S Chiarenza… - elife, 2015 - elifesciences.org
Cytosine DNA methylation (mC) is a genome modification that can regulate the expression
of coding and non-coding genetic elements. However, little is known about the involvement …

Epigenetic memory for stress response and adaptation in plants

T Kinoshita, M Seki - Plant and Cell Physiology, 2014 - academic.oup.com
In contrast to the majority of animal species, plants are sessile organisms and are, therefore,
constantly challenged by environmental perturbations. Over the past few decades, our …

Functional specificities of brassinosteroid and potential utilization for crop improvement

H Tong, C Chu - Trends in Plant Science, 2018 - cell.com
Brassinosteroid (BR) regulates many important agronomic traits and thus has great potential
in agriculture. However, BR application is limited due to its complex effects on plants. The …

Metabolic gene clusters in eukaryotes

HW Nützmann, C Scazzocchio… - Annual Review of …, 2018 - annualreviews.org
In bacteria, more than half of the genes in the genome are organized in operons. In contrast,
in eukaryotes, functionally related genes are usually dispersed across the genome. There …