[HTML][HTML] Genomics of plant speciation

DG Bock, Z Cai, C Elphinstone… - Plant …, 2023 - cell.com
Studies of plants have been instrumental for revealing how new species originate. For
several decades, botanical research has complemented and, in some cases, challenged …

Searching for sympatric speciation in the genomic era

EJ Richards, MR Servedio, CH Martin - BioEssays, 2019 - Wiley Online Library
Sympatric speciation illustrates how natural and sexual selection may create new species in
isolation without geographic barriers. However, recent genomic reanalyses of classic …

Extensive genome-wide phylogenetic discordance is due to incomplete lineage sorting and not ongoing introgression in a rapidly radiated bryophyte genus

O Meleshko, MD Martin, TS Korneliussen… - Molecular biology …, 2021 - academic.oup.com
The relative importance of introgression for diversification has long been a highly disputed
topic in speciation research and remains an open question despite the great attention it has …

[HTML][HTML] Hybrid speciation via inheritance of alternate alleles of parental isolating genes

Z Wang, Y Jiang, H Bi, Z Lu, Y Ma, X Yang, N Chen… - Molecular plant, 2021 - cell.com
It is increasingly realized that homoploid hybrid speciation (HHS), which involves no change
in chromosome number, is an important mechanism of speciation. HHS will likely increase in …

Gene flow creates a mirage of cryptic species in a Southeast Asian spotted stream frog complex

KO Chan, CR Hutter, PL Wood Jr, LL Grismer… - Molecular …, 2020 - Wiley Online Library
Most new cryptic species are described using conventional tree‐and distance‐based
species delimitation methods (SDMs), which rely on phylogenetic arrangements and …

Demographic History and Natural Selection Shape Patterns of Deleterious Mutation Load and Barriers to Introgression across Populus Genome

S Liu, L Zhang, Y Sang, Q Lai, X Zhang… - Molecular biology …, 2022 - academic.oup.com
Hybridization and resulting introgression are important processes shaping the tree of life
and appear to be far more common than previously thought. However, how the genome …

[HTML][HTML] Genome of wild mandarin and domestication history of mandarin

L Wang, F He, Y Huang, J He, S Yang, J Zeng, C Deng… - Molecular plant, 2018 - cell.com
Mandarin (Citrus reticulata) is one of the most important citrus crops worldwide. Its
domestication is believed to have occurred in South China, which has been one of the …

Phylogenomics of the genus Populus reveals extensive interspecific gene flow and balancing selection

M Wang, L Zhang, Z Zhang, M Li, D Wang… - New …, 2020 - Wiley Online Library
Phylogenetic analysis is complicated by interspecific gene flow and the presence of shared
ancestral polymorphisms, particularly those maintained by balancing selection. In this study …

Variation in recombination rate affects detection of outliers in genome scans under neutrality

TR Booker, S Yeaman, MC Whitlock - Molecular ecology, 2020 - Wiley Online Library
Genome scans can potentially identify genetic loci involved in evolutionary processes such
as local adaptation and gene flow. Here, we show that recombination rate variation across a …

A general model to explain repeated turnovers of sex determination in the Salicaceae

W Yang, D Wang, Y Li, Z Zhang, S Tong… - Molecular Biology …, 2021 - academic.oup.com
Dioecy, the presence of separate sexes on distinct individuals, has evolved repeatedly in
multiple plant lineages. However, the specific mechanisms by which sex systems evolve and …