Chloroplast DNA evolution and the origin of amphidiploid Brassica species

JD Palmer, CR Shields, DB Cohen, TJ Orton - Theoretical and Applied …, 1983 - Springer
The origin and evolution of a hybrid species complex in the genus Brassica (cabbage,
turnip, mustard, rapeseed oil) has been explored through mutational analysis of the …

Isolation and structural analysis of chloroplast DNA

JD Palmer - Methods in enzymology, 1986 - Elsevier
Publisher Summary This chapter describes a filter hybridization approach for mapping
chloroplast DNA (cpDNA) restriction sites along with several strategies for generating …

Chloroplast DNA evolution among legumes: loss of a large inverted repeat occurred prior to other sequence rearrangements

JD Palmer, B Osorio, J Aldrich, WF Thompson - Current Genetics, 1987 - Springer
We have compared the sequence organization of four previously uncharacterized legume
chloroplast DNAs-from alfalfa, lupine, wisteria and subclover—to that of legume chloroplast …

Evolutionary and biotechnology implications of plastid genome variation in the inverted‐repeat‐lacking clade of legumes

J Sabir, E Schwarz, N Ellison, J Zhang… - Plant biotechnology …, 2014 - Wiley Online Library
Land plant plastid genomes (plastomes) provide a tractable model for evolutionary study in
that they are relatively compact and gene dense. Among the groups that display an …

Conservation of chloroplast genome structure among vascular plants

JD Palmer, DB Stein - Current genetics, 1986 - Springer
We have constructed the first physical map of a gymnosperm chloroplast genome and
compared its organization with those of a fern and several angiosperms by heterologous …

The chicken or the egg? Plastome evolution and an independent loss of the inverted repeat in papilionoid legumes

C Lee, IS Choi, D Cardoso, HC de Lima… - The Plant …, 2021 - Wiley Online Library
The plastid genome (plastome), while surprisingly constant in gene order and content
across most photosynthetic angiosperms, exhibits variability in several unrelated lineages …

Lost and found: return of the inverted repeat in the legume clade defined by its absence

IS Choi, R Jansen, T Ruhlman - Genome Biology and Evolution, 2019 - academic.oup.com
The plant genome comprises a coevolving, integrated genetic system housed in three
subcellular compartments: the nucleus, mitochondrion, and the plastid. The typical land …

Molecular evolution of chloroplast DNA sequences.

SE Curtis, MT Clegg - Molecular biology and evolution, 1984 - academic.oup.com
Comparative data on the evolution of chloroplast genes are reviewed. The chloroplast
genome has maintained a similar structural organization over most plant taxa so far …

Unusual structure of geranium chloroplast DNA: a triple-sized inverted repeat, extensive gene duplications, multiple inversions, and two repeat families

JD Palmer, JM Nugent… - Proceedings of the …, 1987 - National Acad Sciences
Physical and gene mapping studies reveal that chloroplast DNA from geranium
(Pelargonium hortorum) has sustained a number of extensive duplications and inversions …

rbcL and matK Earn Two Thumbs Up as the Core DNA Barcode for Ferns

FW Li, LY Kuo, CJ Rothfels, A Ebihara, WL Chiou… - PloS one, 2011 - journals.plos.org
Background DNA barcoding will revolutionize our understanding of fern ecology, most
especially because the accurate identification of the independent but cryptic gametophyte …