Coupling of RNA polymerase II transcription elongation with pre-mRNA splicing
T Saldi, MA Cortazar, RM Sheridan… - Journal of molecular …, 2016 - Elsevier
Pre-mRNA maturation frequently occurs at the same time and place as transcription by RNA
polymerase II. The co-transcriptionality of mRNA processing has permitted the evolution of …
polymerase II. The co-transcriptionality of mRNA processing has permitted the evolution of …
Transcription through the nucleosome
T Kujirai, H Kurumizaka - Current Opinion in Structural Biology, 2020 - Elsevier
Highlights•Dynamic changes in the nucleosome structure take place when RNA polymerase
II transcribes through a nucleosome.•Nucleosome reassembly may be mediated by the …
II transcribes through a nucleosome.•Nucleosome reassembly may be mediated by the …
Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT
H Ehara, T Kujirai, M Shirouzu, H Kurumizaka… - Science, 2022 - science.org
During gene transcription, RNA polymerase II (RNAPII) traverses nucleosomes in chromatin,
but the mechanism has remained elusive. Using cryo–electron microscopy, we obtained …
but the mechanism has remained elusive. Using cryo–electron microscopy, we obtained …
[HTML][HTML] Structure of a backtracked hexasomal intermediate of nucleosome transcription
During gene transcription, RNA polymerase II (RNA Pol II) passes nucleosomes with the
help of various elongation factors. Here, we show that RNA Pol II achieves efficient …
help of various elongation factors. Here, we show that RNA Pol II achieves efficient …
Histone dynamics mediate DNA unwrapping and sliding in nucleosomes
GA Armeev, AS Kniazeva, GA Komarova… - Nature …, 2021 - nature.com
Nucleosomes are elementary building blocks of chromatin in eukaryotes. They tightly
wrap∼ 147 DNA base pairs around an octamer of histone proteins. How nucleosome …
wrap∼ 147 DNA base pairs around an octamer of histone proteins. How nucleosome …
Spatial organization of transcribed eukaryotic genes
S Leidescher, J Ribisel, S Ullrich, Y Feodorova… - Nature cell …, 2022 - nature.com
Despite the well-established role of nuclear organization in the regulation of gene
expression, little is known about the reverse: how transcription shapes the spatial …
expression, little is known about the reverse: how transcription shapes the spatial …
Old cogs, new tricks: the evolution of gene expression in a chromatin context
Sophisticated gene-regulatory mechanisms probably evolved in prokaryotes billions of
years before the emergence of modern eukaryotes, which inherited the same basic …
years before the emergence of modern eukaryotes, which inherited the same basic …
Structural perspectives on transcription in chromatin
S Sekine, H Ehara, T Kujirai, H Kurumizaka - Trends in Cell Biology, 2024 - cell.com
In eukaryotes, all genetic processes take place in the cell nucleus, where DNA is packaged
as chromatin in'beads-on-a-string'nucleosome arrays. RNA polymerase II (RNAPII) …
as chromatin in'beads-on-a-string'nucleosome arrays. RNA polymerase II (RNAPII) …
Large-scale ATP-independent nucleosome unfolding by a histone chaperone
DNA accessibility to regulatory proteins is substantially influenced by nucleosome structure
and dynamics. The facilitates chromatin transcription (FACT) complex increases the …
and dynamics. The facilitates chromatin transcription (FACT) complex increases the …
Mechanisms of transcription elongation factor DSIF (Spt4–Spt5)
TM Decker - Journal of molecular biology, 2021 - Elsevier
The transcription elongation factor Spt5 is conserved from bacteria to humans. In
eukaryotes, Spt5 forms a complex with Spt4 and regulates processive transcription …
eukaryotes, Spt5 forms a complex with Spt4 and regulates processive transcription …