In this paper, the Peyrard–Bishop–Dauxois model of DNA dynamics is discussed along with
the fractional effects of the M-truncated derivative and β-derivative. The Kudryashov's R …

Nucleic acids' physical properties have been investigated by theoretical methods based
both on fully atomistic representations and on coarse-grained models, eg, the worm-like …

Motivation The two strands of the DNA double helix locally and spontaneously separate and
recombine in living cells due to the inherent thermal DNA motion. This dynamics results in …

The influence of a single 2H/1H replacement on the frequency generation of different-size
bubbles in the human interferon alpha-17 gene (IFNA17) under various energies was …

Relative lifetimes of inherent double stranded DNA openings with lengths up to ten base
pairs are presented for different gene promoters and corresponding mutants that either …

The distribution of length of a human DNA molecule follows some statistical models. The
core of the approaches is associated with the distribution of the length of the chain of DNA …

In this study we derive analytically the equilibrium melting probabilities for basepairs of a
DNA molecule with a defect site. We assume that the defect is characterized by a change in …

A statistical method is developed to estimate the maximum amplitude of the base pair
fluctuations in a three dimensional mesoscopic model for nucleic acids. The base pair …

We study dsDNA (double strand DNA) melting in detail within varying strip-like confinement
in a two-dimensional lattice model. The interplay between reduced configurational entropy …

We investigate the melting transition of non-supercoiled circular DNA of different lengths,
employing Brownian dynamics simulations. In the absence of supercoiling, we find that …