A field guide to eukaryotic transposable elements
JN Wells, C Feschotte - Annual review of genetics, 2020 - annualreviews.org
Transposable elements (TEs) are mobile DNA sequences that propagate within genomes.
Through diverse invasion strategies, TEs have come to occupy a substantial fraction of …
Through diverse invasion strategies, TEs have come to occupy a substantial fraction of …
Repetitive DNA sequence detection and its role in the human genome
Repetitive DNA sequences playing critical roles in driving evolution, inducing variation, and
regulating gene expression. In this review, we summarized the definition, arrangement, and …
regulating gene expression. In this review, we summarized the definition, arrangement, and …
A beginner's guide to manual curation of transposable elements
Background In the study of transposable elements (TEs), the generation of a high
confidence set of consensus sequences that represent the diversity of TEs found in a given …
confidence set of consensus sequences that represent the diversity of TEs found in a given …
HiTE: a fast and accurate dynamic boundary adjustment approach for full-length transposable element detection and annotation
Recent advancements in genome assembly have greatly improved the prospects for
comprehensive annotation of Transposable Elements (TEs). However, existing methods for …
comprehensive annotation of Transposable Elements (TEs). However, existing methods for …
Evolution of pogo, a separate superfamily of IS630-Tc1-mariner transposons, revealing recurrent domestication events in vertebrates
B Gao, Y Wang, M Diaby, W Zong, D Shen, S Wang… - Mobile DNA, 2020 - Springer
Abstracts Background Tc1/mariner and Zator, as two superfamilies of IS630-Tc1-mariner
(ITm) group, have been well-defined. However, the molecular evolution and domestication …
(ITm) group, have been well-defined. However, the molecular evolution and domestication …
Third-generation sequencing reveals the adaptive role of the epigenome in three deep-sea polychaetes
The roles of DNA methylation in invertebrates are poorly characterized, and critical data are
missing for the phylum Annelida. We fill this knowledge gap by conducting the first genome …
missing for the phylum Annelida. We fill this knowledge gap by conducting the first genome …
Mosquito genomes are frequently invaded by transposable elements through horizontal transfer
Transposable elements (TEs) are mobile genetic elements that parasitize basically all
eukaryotic species genomes. Due to their complexity, an in-depth TE characterization is only …
eukaryotic species genomes. Due to their complexity, an in-depth TE characterization is only …
Fourth report on chicken genes and chromosomes 2022
The chicken continues to hold its position as a leading model organism within many areas of
research, as well as being a major source of protein for human consumption. The First …
research, as well as being a major source of protein for human consumption. The First …
Recent expansion of metabolic versatility in Diplonema papillatum, the model species of a highly speciose group of marine eukaryotes
Background Diplonemid flagellates are among the most abundant and species-rich of
known marine microeukaryotes, colonizing all habitats, depths, and geographic regions of …
known marine microeukaryotes, colonizing all habitats, depths, and geographic regions of …
The price of human evolution: Cancer-testis antigens, the decline in male fertility and the increase in cancer
The increasing frequency of general and particularly male cancer coupled with the reduction
in male fertility seen worldwide motivated us to seek a potential evolutionary link between …
in male fertility seen worldwide motivated us to seek a potential evolutionary link between …