Applications of support vector machine (SVM) learning in cancer genomics
S Huang, N Cai, PP Pacheco… - Cancer genomics & …, 2018 - cgp.iiarjournals.org
Machine learning with maximization (support) of separating margin (vector), called support
vector machine (SVM) learning, is a powerful classification tool that has been used for …
vector machine (SVM) learning, is a powerful classification tool that has been used for …
[PDF][PDF] Machine learning in bioinformatics
This article reviews machine learning methods for bioinformatics. It presents modelling
methods, such as supervised classification, clustering and probabilistic graphical models for …
methods, such as supervised classification, clustering and probabilistic graphical models for …
Interferome v2. 0: an updated database of annotated interferon-regulated genes
I Rusinova, S Forster, S Yu, A Kannan… - Nucleic acids …, 2012 - academic.oup.com
Abstract Interferome v2. 0 (http://interferome. its. monash. edu. au/interferome/) is an update
of an earlier version of the Interferome DB published in the 2009 NAR database edition …
of an earlier version of the Interferome DB published in the 2009 NAR database edition …
[图书][B] Sample size calculations in clinical research
Praise for the Second Edition:"… this is a useful, comprehensive compendium of almost
every possible sample size formula. The strong organization and carefully defined formulae …
every possible sample size formula. The strong organization and carefully defined formulae …
[9] TM4 microarray software suite
AI Saeed, NK Bhagabati, JC Braisted, W Liang… - Methods in …, 2006 - Elsevier
Powerful specialized software is essential for managing, quantifying, and ultimately deriving
scientific insight from results of a microarray experiment. We have developed a suite of …
scientific insight from results of a microarray experiment. We have developed a suite of …
Rank products: a simple, yet powerful, new method to detect differentially regulated genes in replicated microarray experiments
One of the main objectives in the analysis of microarray experiments is the identification of
genes that are differentially expressed under two experimental conditions. This task is …
genes that are differentially expressed under two experimental conditions. This task is …
Gene regulatory network inference: data integration in dynamic models—a review
M Hecker, S Lambeck, S Toepfer, E Van Someren… - Biosystems, 2009 - Elsevier
Systems biology aims to develop mathematical models of biological systems by integrating
experimental and theoretical techniques. During the last decade, many systems biological …
experimental and theoretical techniques. During the last decade, many systems biological …
Statistical tests for differential expression in cDNA microarray experiments
X Cui, GA Churchill - Genome biology, 2003 - Springer
Extracting biological information from microarray data requires appropriate statistical
methods. The simplest statistical method for detecting differential expression is the t test …
methods. The simplest statistical method for detecting differential expression is the t test …
[PDF][PDF] Nonalcoholic steatohepatitis is associated with altered hepatic MicroRNA expression
O Cheung, P Puri, C Eicken, MJ Contos… - …, 2008 - Wiley Online Library
The expression of microRNA in nonalcoholic steatohepatitis (NASH) and their role in the
genesis of NASH are not known. The aims of this study were to:(1) identify differentially …
genesis of NASH are not known. The aims of this study were to:(1) identify differentially …
Detecting differential gene expression with a semiparametric hierarchical mixture method
Mixture modeling provides an effective approach to the differential expression problem in
microarray data analysis. Methods based on fully parametric mixture models are available …
microarray data analysis. Methods based on fully parametric mixture models are available …