[HTML][HTML] Optical tweezers in single-molecule biophysics

CJ Bustamante, YR Chemla, S Liu… - Nature Reviews Methods …, 2021 - nature.com
Optical tweezers have become the method of choice in single-molecule manipulation
studies. In this Primer, we first review the physical principles of optical tweezers and the …

Shaping the future of manipulation

K Dholakia, T Čižmár - Nature photonics, 2011 - nature.com
Optical forces can be used to manipulate biological and colloidal material in a non-contact
manner. This forms the foundation of a wealth of exciting science, particularly in the fields of …

Transcription shapes 3D chromatin organization by interacting with loop extrusion

EJ Banigan, W Tang… - Proceedings of the …, 2023 - National Acad Sciences
Cohesin folds mammalian interphase chromosomes by extruding the chromatin fiber into
numerous loops.“Loop extrusion” can be impeded by chromatin-bound factors, such as …

Single-molecule force spectroscopy: optical tweezers, magnetic tweezers and atomic force microscopy

KC Neuman, A Nagy - Nature methods, 2008 - nature.com
Single-molecule force spectroscopy has emerged as a powerful tool to investigate the forces
and motions associated with biological molecules and enzymatic activity. The most common …

[HTML][HTML] RNA polymerase II regulates topoisomerase 1 activity to favor efficient transcription

L Baranello, D Wojtowicz, K Cui, BN Devaiah… - Cell, 2016 - cell.com
We report a mechanism through which the transcription machinery directly controls
topoisomerase 1 (TOP1) activity to adjust DNA topology throughout the transcription cycle …

Optical trapping

KC Neuman, SM Block - Review of scientific instruments, 2004 - pubs.aip.org
Since their invention just over 20 years ago, optical traps have emerged as a powerful tool
with broad-reaching applications in biology and physics. Capabilities have evolved from …

Cellular roles of DNA topoisomerases: a molecular perspective

JC Wang - Nature reviews Molecular cell biology, 2002 - nature.com
DNA topoisomerases are the magicians of the DNA world—by allowing DNA strands or
double helices to pass through each other, they can solve all of the topological problems of …

Artificial molecular machines

V Balzani, A Credi, FM Raymo… - Angewandte Chemie …, 2000 - Wiley Online Library
The miniaturization of components used in the construction of working devices is being
pursued currently by the large‐downward (top‐down) fabrication. This approach, however …

Manipulation and motion of organelles and single molecules in living cells

K Norregaard, R Metzler, CM Ritter… - Chemical …, 2017 - ACS Publications
The biomolecule is among the most important building blocks of biological systems, and a
full understanding of its function forms the scaffold for describing the mechanisms of higher …

[HTML][HTML] Ten years of tension: single-molecule DNA mechanics

C Bustamante, Z Bryant, SB Smith - Nature, 2003 - nature.com
The basic features of DNA were elucidated during the half-century following the discovery of
the double helix. But it is only during the past decade that researchers have been able to …