SEEK: a systems biology data and model management platform

K Wolstencroft, S Owen, O Krebs, Q Nguyen… - BMC systems …, 2015 - Springer
Background Systems biology research typically involves the integration and analysis of
heterogeneous data types in order to model and predict biological processes. Researchers …

Literature review of (Q) SAR modelling of nanomaterial toxicity

C Oksel, CY Ma, JJ Liu, T Wilkins, XZ Wang - Modelling the toxicity of …, 2017 - Springer
Despite the clear benefits that nanotechnology can bring to various sectors of industry, there
are serious concerns about the potential health risks associated with engineered …

[HTML][HTML] Data management and data enrichment for systems biology projects

U Wittig, M Rey, A Weidemann, W Müller - Journal of biotechnology, 2017 - Elsevier
Collecting, curating, interlinking, and sharing high quality data are central to de. NBI-SysBio,
the systems biology data management service center within the de. NBI network (German …

The plant ontology: a tool for plant genomics

L Cooper, P Jaiswal - Plant bioinformatics: Methods and protocols, 2016 - Springer
The use of controlled, structured vocabularies (ontologies) has become a critical tool for
scientists in the post-genomic era of massive datasets. Adoption and integration of common …

How modeling standards, software, and initiatives support reproducibility in systems biology and systems medicine

D Waltemath, O Wolkenhauer - IEEE Transactions on …, 2016 - ieeexplore.ieee.org
Objective: Only reproducible results are of significance to science. The lack of suitable
standards and appropriate support of standards in software tools has led to numerous …

Sharing big biomedical data

AW Toga, ID Dinov - Journal of big data, 2015 - Springer
Abstract Background The promise of Big Biomedical Data may be offset by the enormous
challenges in handling, analyzing, and sharing it. In this paper, we provide a framework for …

RETRACTED ARTICLE: ensemble learning-based gene signature and risk model for predicting prognosis of triple-negative breast cancer

T Li, S Chen, Y Zhang, Q Zhao, K Ma, X Jiang… - Functional & Integrative …, 2023 - Springer
Although medical science has been fully developed, due to the high heterogeneity of triple-
negative breast cancer (TNBC), it is still difficult to use reasonable and precise treatment. In …

The Crucial Role of Interdisciplinary Conferences in Advancing Explainable AI in Healthcare

AU Patel, Q Gu, R Esper, D Maeser, N Maeser - BioMedInformatics, 2024 - mdpi.com
As artificial intelligence (AI) integrates within the intersecting domains of healthcare and
computational biology, developing interpretable models tailored to medical contexts is met …

Ecological requirements for pallid sturgeon reproduction and recruitment in the Missouri River—Annual report 2014

AJ Delonay, KA Chojnacki, RB Jacobson, PJ Braaten… - 2016 - pubs.usgs.gov
Abstract The Comprehensive Sturgeon Research Project is a multiyear, multiagency
collaborative research framework developed to provide information to support pallid …

[HTML][HTML] Personal genomic information management and personalized medicine: challenges, current solutions, and roles of HIM professionals

A Alzu'bi, L Zhou, V Watzlaf - Perspectives in Health Information …, 2014 - ncbi.nlm.nih.gov
In recent years, the term personalized medicine has received more and more attention in the
field of healthcare. The increasing use of this term is closely related to the astonishing …