Whole‐genome sequencing approaches for conservation biology: Advantages, limitations and practical recommendations
AP Fuentes‐Pardo, DE Ruzzante - Molecular ecology, 2017 - Wiley Online Library
Whole‐genome resequencing (WGR) is a powerful method for addressing fundamental
evolutionary biology questions that have not been fully resolved using traditional methods …
evolutionary biology questions that have not been fully resolved using traditional methods …
The utility of single nucleotide polymorphism (SNP) data in phylogenetics
Resolving the genealogy of life—the phylogenetic relationships that describe the
evolutionary history of species—remains one of the great challenges of systematic biology …
evolutionary history of species—remains one of the great challenges of systematic biology …
Annotated checklist of the birds of Brazil by the Brazilian Ornithological Records Committee—second edition
An updated version of the checklist of birds of Brazil is presented, along with a summary of
the changes approved by the Brazilian Ornithological Records Committee's Taxonomy …
the changes approved by the Brazilian Ornithological Records Committee's Taxonomy …
HybPiper: Extracting coding sequence and introns for phylogenetics from high‐throughput sequencing reads using target enrichment
Premise of the study: Using sequence data generated via target enrichment for
phylogenetics requires reassembly of high‐throughput sequence reads into loci, presenting …
phylogenetics requires reassembly of high‐throughput sequence reads into loci, presenting …
Phylogenomic insights into the evolution of stinging wasps and the origins of ants and bees
Summary The stinging wasps (Hymenoptera: Aculeata) are an extremely diverse lineage of
hymenopteran insects, encompassing over 70,000 described species and a diversity of life …
hymenopteran insects, encompassing over 70,000 described species and a diversity of life …
Earth history and the passerine superradiation
Avian diversification has been influenced by global climate change, plate tectonic
movements, and mass extinction events. However, the impact of these factors on the …
movements, and mass extinction events. However, the impact of these factors on the …
Enriching the ant tree of life: enhanced UCE bait set for genome‐scale phylogenetics of ants and other Hymenoptera
MG Branstetter, JT Longino, PS Ward… - Methods in Ecology …, 2017 - Wiley Online Library
Targeted enrichment of conserved genomic regions (eg ultraconserved elements or UCEs)
has emerged as a promising tool for inferring evolutionary history in many organismal …
has emerged as a promising tool for inferring evolutionary history in many organismal …
Phylogenomics using formalin‐fixed and 100+ year‐old intractable natural history specimens
Museum specimens provide a wealth of information to biologists, but obtaining genetic data
from formalin‐fixed and fluid‐preserved specimens remains challenging. While DNA …
from formalin‐fixed and fluid‐preserved specimens remains challenging. While DNA …
Sequence capture versus restriction site associated DNA sequencing for shallow systematics
Sequence capture and restriction site associated DNA sequencing (RAD-Seq) are two
genomic enrichment strategies for applying next-generation sequencing technologies to …
genomic enrichment strategies for applying next-generation sequencing technologies to …
Identifying conserved genomic elements and designing universal bait sets to enrich them
BC Faircloth - Methods in Ecology and Evolution, 2017 - Wiley Online Library
Targeted enrichment of conserved genomic regions is a popular method for collecting large
amounts of sequence data from non‐model taxa for phylogenetic, phylogeographic and …
amounts of sequence data from non‐model taxa for phylogenetic, phylogeographic and …